Detailed information
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AT729_RS00135 | Genome accession | NZ_CP015886 |
| Coordinates | 17821..18171 (-) | Length | 116 a.a. |
| NCBI ID | WP_079889311.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain 38277 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 12821..23171
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT729_RS00110 (AT729_00017) | lpxC | 14570..15493 (-) | 924 | WP_002216134.1 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | - |
| AT729_RS00120 (AT729_00018) | - | 16336..16713 (-) | 378 | Protein_16 | pilin | - |
| AT729_RS00125 (AT729_00019) | pilE | 16847..17185 (-) | 339 | WP_079889310.1 | pilin | Machinery gene |
| AT729_RS00130 (AT729_00020) | - | 17384..17737 (-) | 354 | Protein_18 | pilin | - |
| AT729_RS00135 (AT729_00021) | pilE | 17821..18171 (-) | 351 | WP_079889311.1 | pilin | Machinery gene |
| AT729_RS00145 (AT729_00022) | - | 18462..18845 (-) | 384 | Protein_20 | pilin | - |
| AT729_RS00150 (AT729_00023) | - | 18955..19362 (-) | 408 | Protein_21 | pilin | - |
| AT729_RS00155 (AT729_00024) | - | 19482..19832 (-) | 351 | Protein_22 | pilin | - |
| AT729_RS00160 (AT729_00025) | - | 20176..20562 (-) | 387 | Protein_23 | pilin | - |
| AT729_RS00165 (AT729_00026) | - | 20745..21173 (-) | 429 | Protein_24 | pilin | - |
| AT729_RS14035 | - | 21696..22001 (-) | 306 | Protein_25 | pilin | - |
| AT729_RS14525 (AT729_00028) | - | 22059..22415 (-) | 357 | Protein_26 | pilin | - |
| AT729_RS00180 (AT729_00029) | - | 22444..22773 (-) | 330 | WP_002218455.1 | FKBP-type peptidyl-prolyl cis-trans isomerase | - |
| AT729_RS00185 (AT729_00030) | - | 22851..23069 (-) | 219 | WP_002218456.1 | DUF2061 domain-containing protein | - |
Sequence
Protein
Download Length: 116 a.a. Molecular weight: 12446.20 Da Isoelectric Point: 10.2432
>NTDB_id=182766 AT729_RS00135 WP_079889311.1 17821..18171(-) (pilE) [Neisseria meningitidis strain 38277]
MAEGQKSAVTEYYLNHGIWPGGNSDAGVASSSTIKGKYVQKVEVKNGVVTATMLSTGVNKEIQGKKLSLWAKRQDGSVKW
FCGLPVTRDAVAKDDAVTAAASDKQIDTKLKKPFSR
MAEGQKSAVTEYYLNHGIWPGGNSDAGVASSSTIKGKYVQKVEVKNGVVTATMLSTGVNKEIQGKKLSLWAKRQDGSVKW
FCGLPVTRDAVAKDDAVTAAASDKQIDTKLKKPFSR
Nucleotide
Download Length: 351 bp
>NTDB_id=182766 AT729_RS00135 WP_079889311.1 17821..18171(-) (pilE) [Neisseria meningitidis strain 38277]
TTGGCTGAAGGTCAAAAATCAGCCGTCACCGAGTATTACCTGAATCACGGCATATGGCCCGGCGGCAACAGTGATGCCGG
CGTGGCATCTTCTTCAACAATCAAAGGCAAATATGTTCAGAAAGTTGAAGTCAAAAACGGCGTCGTTACCGCCACAATGC
TTTCAACCGGCGTAAACAAAGAAATCCAAGGCAAAAAACTCTCCCTGTGGGCCAAGCGTCAAGACGGTTCGGTAAAATGG
TTCTGCGGACTGCCGGTTACGCGCGACGCCGTCGCCAAAGACGACGCCGTTACCGCCGCCGCCAGCGACAAGCAGATCGA
CACCAAACTAAAGAAACCGTTTTCCCGATAA
TTGGCTGAAGGTCAAAAATCAGCCGTCACCGAGTATTACCTGAATCACGGCATATGGCCCGGCGGCAACAGTGATGCCGG
CGTGGCATCTTCTTCAACAATCAAAGGCAAATATGTTCAGAAAGTTGAAGTCAAAAACGGCGTCGTTACCGCCACAATGC
TTTCAACCGGCGTAAACAAAGAAATCCAAGGCAAAAAACTCTCCCTGTGGGCCAAGCGTCAAGACGGTTCGGTAAAATGG
TTCTGCGGACTGCCGGTTACGCGCGACGCCGTCGCCAAAGACGACGCCGTTACCGCCGCCGCCAGCGACAAGCAGATCGA
CACCAAACTAAAGAAACCGTTTTCCCGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae strain FA1090 |
76.147 |
93.966 |
0.716 |
| pilE | Neisseria gonorrhoeae MS11 |
72.727 |
94.828 |
0.69 |