Detailed information NTG0181403

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: BSA41_RS14860
• Genome accession: NZ_CP015610
• Coordinates: 2819176..2819832 (-)
• Length: 218 a.a.
• NCBI ID: WP_231120176.1
• Uniprot ID: -
• Organism: Bacillus safensis strain U41
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2814176..2824832

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSA41_RS14825 (BSA41_14510)	fliW	2814314..2814748 (-)	435	WP_075611996.1	flagellar assembly protein FliW	-
BSA41_RS14830 (BSA41_14515)	-	2814777..2815355 (-)	579	WP_041088049.1	DUF6470 family protein	-
BSA41_RS14835 (BSA41_14520)	flgL	2815402..2816310 (-)	909	WP_041088047.1	flagellar hook-associated protein FlgL	-
BSA41_RS14840 (BSA41_14525)	flgK	2816320..2817840 (-)	1521	WP_058837539.1	flagellar hook-associated protein FlgK	-
BSA41_RS14845 (BSA41_14530)	-	2817856..2818338 (-)	483	WP_075611997.1	flagellar protein FlgN	-
BSA41_RS14850 (BSA41_14535)	flgM	2818357..2818620 (-)	264	WP_075611998.1	flagellar biosynthesis anti-sigma factor FlgM	-
BSA41_RS14855 (BSA41_14540)	-	2818700..2819119 (-)	420	WP_075611999.1	TIGR03826 family flagellar region protein	-
BSA41_RS14860 (BSA41_14545)	comFC	2819176..2819832 (-)	657	WP_231120176.1	ComF family protein	Machinery gene
BSA41_RS14865 (BSA41_14550)	-	2819859..2820152 (-)	294	WP_041088040.1	late competence development ComFB family protein	-
BSA41_RS14870 (BSA41_14555)	comFA	2820202..2821599 (-)	1398	WP_269199592.1	DEAD/DEAH box helicase	Machinery gene
BSA41_RS14875 (BSA41_14560)	-	2821720..2822562 (-)	843	WP_041088038.1	DegV family protein	-
BSA41_RS14880 (BSA41_14565)	degU	2822778..2823467 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
BSA41_RS14885 (BSA41_14570)	degS	2823532..2824707 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 25008.16 Da
• Isoelectric Point: 10.1258

>NTDB_id=181403 BSA41_RS14860 WP_231120176.1 2819176..2819832(-) (comFC) [Bacillus safensis strain U41]
MPAFTWKSFLLLNDDRLCVACKNDLVKIERPICPTCGRAQSNDQMCQDCDRWNERPDSTKVLLKNRSVYTYNELMKDVLA
RFKFRGDTALVELFKRDVQAAFKHSFSKKEPLLIPIPLSHERLKERGFNQSVIIASLIGKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKHTDVIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=181403 BSA41_RS14860 WP_231120176.1 2819176..2819832(-) (comFC) [Bacillus safensis strain U41]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATGACTTAGTTAA
GATTGAGCGTCCTATTTGTCCAACGTGTGGAAGGGCGCAGTCAAATGACCAAATGTGCCAGGACTGTGATAGATGGAATG
AACGCCCTGATTCTACTAAAGTCCTTTTGAAAAATAGGTCAGTTTATACTTACAACGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGTTGAGCTGTTTAAACGAGATGTACAAGCAGCATTTAAACATTCCTTCAG
CAAAAAAGAACCATTGCTGATTCCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAACCAGTCCGTCATCA
TCGCTTCCTTGATAGGTAAGCCAATATTGCAGCCACTAGTGAAAATACATCAAAGTAAGCAGTCCAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATAAAGCATACAGATGTGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATTTATGATGCAGCAAGAATTTTAAAAGATGCAGGTGCCAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (131-216)

• Double zinc ribbon domain (DZR_2) (14-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	48.611	99.083	0.482
comFC/cflB	Streptococcus pneumoniae Rx1	38.14	98.624	0.376
comFC/cflB	Streptococcus pneumoniae D39	38.14	98.624	0.376
comFC/cflB	Streptococcus pneumoniae R6	38.14	98.624	0.376
comFC/cflB	Streptococcus pneumoniae TIGR4	38.14	98.624	0.376
comFC/cflB	Streptococcus mitis NCTC 12261	36.697	100	0.367
comFC/cflB	Streptococcus mitis SK321	37.209	98.624	0.367