Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | V471_RS04560 | Genome accession | NZ_CP015283 |
| Coordinates | 877274..877864 (+) | Length | 196 a.a. |
| NCBI ID | WP_002886628.1 | Uniprot ID | - |
| Organism | Streptococcus salivarius strain ATCC 25975 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 872274..882864
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V471_RS04545 (V471_04480) | - | 872289..873308 (+) | 1020 | WP_171021848.1 | IS30-like element IS1139 family transposase | - |
| V471_RS04550 (V471_04485) | - | 873472..876381 (+) | 2910 | WP_045771731.1 | glycoside hydrolase family 68 protein | - |
| V471_RS04555 (V471_04490) | upp | 876471..877100 (+) | 630 | WP_002883819.1 | uracil phosphoribosyltransferase | - |
| V471_RS04560 (V471_04495) | clpP | 877274..877864 (+) | 591 | WP_002886628.1 | ATP-dependent Clp protease proteolytic subunit ClpP | Regulator |
| V471_RS04565 (V471_04500) | - | 877950..878399 (+) | 450 | WP_014633576.1 | YlbF family regulator | - |
| V471_RS04570 (V471_04505) | - | 878392..878673 (+) | 282 | WP_002890011.1 | YlbG family protein | - |
| V471_RS04575 (V471_04510) | - | 878828..880003 (+) | 1176 | WP_045771732.1 | ABC transporter substrate-binding protein | - |
| V471_RS04580 (V471_04515) | - | 880047..880931 (+) | 885 | WP_002883743.1 | branched-chain amino acid ABC transporter permease | - |
| V471_RS04585 (V471_04520) | - | 880935..881885 (+) | 951 | WP_002883720.1 | branched-chain amino acid ABC transporter permease | - |
| V471_RS04590 (V471_04525) | - | 881888..882652 (+) | 765 | WP_045771733.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21519.54 Da Isoelectric Point: 4.4829
>NTDB_id=178298 V471_RS04560 WP_002886628.1 877274..877864(+) (clpP) [Streptococcus salivarius strain ATCC 25975]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMANNQLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMANNQLK
Nucleotide
Download Length: 591 bp
>NTDB_id=178298 V471_RS04560 WP_002886628.1 877274..877864(+) (clpP) [Streptococcus salivarius strain ATCC 25975]
ATGATTCCTGTAGTAATTGAACAAACATCACGCGGTGAGCGTTCTTATGATATTTACTCACGTTTGCTCAAGGATCGTAT
CATCATGTTAACAGGTCCTGTTGAAGATAATATGGCAAACTCAATTATTGCCCAACTCTTGTTTTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTTTATGTTAATACACCAGGTGGATCCGTTTCGGCTGGTCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAGACTATCGTTATGGGGATGGCAGCATCTATGGGAACAGTTATCGCTTCCAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAGTACATGATTCACCAACCAATGGGCGGTACTGGTGGCGGTACGCAACAAA
CAGACATGGCTATCGCAGCTGAACACTTGCTCAAGACACGTAATAATTTGGAGCAAATCTTGGCAGATAATTCTGGACAA
CCAATTGAAAAAGTTCATGTAGACGCTGAACGTGACAATTGGATGAGTGCTCAAGAAACGCTTGAATATGGTTTCATCGA
TGAAATCATGGCTAATAACCAATTAAAATAA
ATGATTCCTGTAGTAATTGAACAAACATCACGCGGTGAGCGTTCTTATGATATTTACTCACGTTTGCTCAAGGATCGTAT
CATCATGTTAACAGGTCCTGTTGAAGATAATATGGCAAACTCAATTATTGCCCAACTCTTGTTTTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTTTATGTTAATACACCAGGTGGATCCGTTTCGGCTGGTCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAGACTATCGTTATGGGGATGGCAGCATCTATGGGAACAGTTATCGCTTCCAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAGTACATGATTCACCAACCAATGGGCGGTACTGGTGGCGGTACGCAACAAA
CAGACATGGCTATCGCAGCTGAACACTTGCTCAAGACACGTAATAATTTGGAGCAAATCTTGGCAGATAATTCTGGACAA
CCAATTGAAAAAGTTCATGTAGACGCTGAACGTGACAATTGGATGAGTGCTCAAGAAACGCTTGAATATGGTTTCATCGA
TGAAATCATGGCTAATAACCAATTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
98.469 |
100 |
0.985 |
| clpP | Streptococcus thermophilus LMD-9 |
98.469 |
100 |
0.985 |
| clpP | Streptococcus pneumoniae Rx1 |
94.359 |
99.49 |
0.939 |
| clpP | Streptococcus pneumoniae D39 |
94.359 |
99.49 |
0.939 |
| clpP | Streptococcus pneumoniae R6 |
94.359 |
99.49 |
0.939 |
| clpP | Streptococcus pneumoniae TIGR4 |
94.359 |
99.49 |
0.939 |
| clpP | Streptococcus pyogenes JRS4 |
90.816 |
100 |
0.908 |
| clpP | Streptococcus pyogenes MGAS315 |
90.816 |
100 |
0.908 |
| clpP | Streptococcus mutans UA159 |
87.755 |
100 |
0.878 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
87.245 |
100 |
0.872 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.735 |
100 |
0.867 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
58.163 |
100 |
0.582 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.031 |
98.469 |
0.571 |