Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | A4A60_RS18710 | Genome accession | NZ_CP015222 |
| Coordinates | 3514742..3515335 (+) | Length | 197 a.a. |
| NCBI ID | WP_003228214.1 | Uniprot ID | A0A199WEF2 |
| Organism | Bacillus subtilis strain HRBS-10TDI13 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3509742..3520335
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4A60_RS18680 (A4A60_18690) | aspP | 3510716..3512278 (+) | 1563 | WP_003228228.1 | aspartate/proton symporter AspP | - |
| A4A60_RS18685 (A4A60_18695) | - | 3512373..3512957 (+) | 585 | WP_003228226.1 | TetR family transcriptional regulator | - |
| A4A60_RS18690 (A4A60_18700) | psmA | 3513039..3513374 (+) | 336 | WP_014480966.1 | SMR family transporter | - |
| A4A60_RS18695 (A4A60_18705) | psmB | 3513374..3513694 (+) | 321 | WP_014480967.1 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| A4A60_RS18700 (A4A60_18710) | yvdQ | 3513730..3514238 (-) | 509 | Protein_3641 | DUF3231 family protein | - |
| A4A60_RS18710 (A4A60_18720) | clpP | 3514742..3515335 (+) | 594 | WP_003228214.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| A4A60_RS18715 (A4A60_18725) | pgmB | 3515398..3516072 (-) | 675 | WP_014480982.1 | beta-phosphoglucomutase | - |
| A4A60_RS18720 (A4A60_18730) | malL | 3516069..3517754 (-) | 1686 | WP_033881298.1 | oligo-1,6-glucosidase | - |
| A4A60_RS18725 (A4A60_18735) | mdxK | 3517747..3520020 (-) | 2274 | WP_014480985.1 | maltose phosphorylase | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 21682.00 Da Isoelectric Point: 4.9416
>NTDB_id=177682 A4A60_RS18710 WP_003228214.1 3514742..3515335(+) (clpP) [Bacillus subtilis strain HRBS-10TDI13]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK
Nucleotide
Download Length: 594 bp
>NTDB_id=177682 A4A60_RS18710 WP_003228214.1 3514742..3515335(+) (clpP) [Bacillus subtilis strain HRBS-10TDI13]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCATCAATGGGCGCTTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCACTTGGCGGTGCGCAAGGTCAGGCGA
CAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAACTAAACAAAGTCCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAGTAA
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCATCAATGGGCGCTTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCACTTGGCGGTGCGCAAGGTCAGGCGA
CAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAACTAAACAAAGTCCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.617 |
95.431 |
0.655 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.163 |
99.492 |
0.579 |
| clpP | Streptococcus thermophilus LMD-9 |
58.163 |
99.492 |
0.579 |
| clpP | Streptococcus pneumoniae D39 |
57.812 |
97.462 |
0.563 |
| clpP | Streptococcus pneumoniae Rx1 |
57.812 |
97.462 |
0.563 |
| clpP | Streptococcus pneumoniae R6 |
57.812 |
97.462 |
0.563 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.812 |
97.462 |
0.563 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
57.895 |
96.447 |
0.558 |
| clpP | Streptococcus pyogenes JRS4 |
56.122 |
99.492 |
0.558 |
| clpP | Streptococcus pyogenes MGAS315 |
56.122 |
99.492 |
0.558 |
| clpP | Streptococcus mutans UA159 |
54.822 |
100 |
0.548 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
55.789 |
96.447 |
0.538 |