Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   BTR42_RS02930 Genome accession   NZ_CP018822
Coordinates   531850..532065 (+) Length   71 a.a.
NCBI ID   WP_077497995.1    Uniprot ID   -
Organism   Streptococcus gallolyticus subsp. gallolyticus DSM 16831     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 526850..537065
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTR42_RS12660 (BTR42_02620) - 527911..528084 (+) 174 WP_167367607.1 hypothetical protein -
  BTR42_RS02900 (BTR42_02625) - 528087..528410 (+) 324 WP_077496335.1 hypothetical protein -
  BTR42_RS02905 (BTR42_02630) - 528426..528722 (+) 297 WP_077496337.1 DUF7365 family protein -
  BTR42_RS02910 (BTR42_02635) - 528719..528916 (+) 198 WP_077496339.1 holin -
  BTR42_RS02915 (BTR42_02640) - 528906..530183 (+) 1278 WP_077496341.1 LysM peptidoglycan-binding domain-containing protein -
  BTR42_RS02920 (BTR42_02645) - 530470..530997 (+) 528 WP_077496343.1 Panacea domain-containing protein -
  BTR42_RS02925 (BTR42_02650) - 530985..531842 (+) 858 WP_077496345.1 hypothetical protein -
  BTR42_RS02930 (BTR42_02655) prx 531850..532065 (+) 216 WP_077497995.1 hypothetical protein Regulator
  BTR42_RS02935 (BTR42_02660) - 532220..532828 (+) 609 WP_009853551.1 MarC family protein -
  BTR42_RS02940 (BTR42_02665) - 533781..535241 (+) 1461 WP_061459007.1 nicotinate phosphoribosyltransferase -
  BTR42_RS02945 (BTR42_02670) nadE 535238..536062 (+) 825 WP_077496347.1 ammonia-dependent NAD(+) synthetase -

Sequence

Protein


Download         Length: 71 a.a.        Molecular weight: 8238.48 Da        Isoelectric Point: 4.9860

>NTDB_id=176170 BTR42_RS02930 WP_077497995.1 531850..532065(+) (prx) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
MNRDFFSNNKVGEKLTLYYDELKEAIDRGYIKGDTVQIIRKNGLVFSYVLPNEPVEFYELAAMHVYGIIGM

Nucleotide


Download         Length: 216 bp        

>NTDB_id=176170 BTR42_RS02930 WP_077497995.1 531850..532065(+) (prx) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
ATGAATCGAGACTTTTTTTCGAATAATAAAGTAGGAGAAAAACTCACGCTATATTATGATGAACTAAAAGAAGCGATTGA
TAGAGGCTATATAAAGGGTGATACTGTACAAATTATTAGAAAGAATGGGCTAGTATTTAGCTATGTTCTCCCTAATGAAC
CAGTAGAGTTCTACGAGTTAGCAGCCATGCACGTTTATGGTATAATAGGCATGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

60.87

64.789

0.394
  prx Streptococcus pyogenes MGAS315

71.795

54.93

0.394
  prx Streptococcus pyogenes MGAS315

63.636

61.972

0.394
  prx Streptococcus pyogenes MGAS315

69.231

54.93

0.38
  prx Streptococcus pyogenes MGAS315

67.5

56.338

0.38
  prx Streptococcus pyogenes MGAS8232

65

56.338

0.366
  prx Streptococcus pyogenes MGAS315

70.27

52.113

0.366