Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   A2G56_RS09735 Genome accession   NZ_CP014835
Coordinates   2127585..2128256 (+) Length   223 a.a.
NCBI ID   WP_062712117.1    Uniprot ID   -
Organism   Streptococcus halotolerans strain HTS9     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2122585..2133256
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2G56_RS09705 - 2122863..2124455 (+) 1593 WP_062712102.1 DEAD/DEAH box helicase -
  A2G56_RS09710 - 2124578..2124838 (-) 261 WP_062712104.1 GIY-YIG nuclease family protein -
  A2G56_RS09715 - 2124831..2125595 (-) 765 WP_062712107.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  A2G56_RS09720 - 2125853..2126383 (+) 531 WP_062712109.1 isoprenylcysteine carboxyl methyltransferase family protein -
  A2G56_RS09725 - 2126418..2126606 (-) 189 WP_062712112.1 hypothetical protein -
  A2G56_RS09730 - 2126766..2127515 (+) 750 WP_062712115.1 lysophospholipid acyltransferase family protein -
  A2G56_RS09735 comEA/celA/cilE 2127585..2128256 (+) 672 WP_062712117.1 helix-hairpin-helix domain-containing protein Machinery gene
  A2G56_RS09740 comEC/celB 2128249..2130480 (+) 2232 WP_062712120.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  A2G56_RS09745 - 2130698..2131348 (-) 651 WP_062712123.1 amino acid ABC transporter permease -
  A2G56_RS09750 - 2131357..2132055 (-) 699 WP_062712127.1 amino acid ABC transporter permease -
  A2G56_RS09755 - 2132075..2132902 (-) 828 WP_062712129.1 transporter substrate-binding domain-containing protein -

Sequence


Protein


Download         Length: 223 a.a.        Molecular weight: 23911.85 Da        Isoelectric Point: 4.4843

>NTDB_id=174502 A2G56_RS09735 WP_062712117.1 2127585..2128256(+) (comEA/celA/cilE) [Streptococcus halotolerans strain HTS9]
MFEDMLEKIHTNKVVVGLGGLVILLLMTCLFLLRNPSKETQEELLPSWSGQSETISSTTMPSKEGSQAEKSQSSTMITVD
VKGAVKKPGVYDLPSGSRVNDAILLAGGLREDADRKSVNFAQKLSDEGIVYVASQGENISVINSSVAPQNSTDSSEVSTG
KVDLNRATLADLQTISGIGQKRAQDIIDYRDSNGGFKSVDDLSNVSGIGDKTLEKLREEVTVD

Nucleotide


Download         Length: 672 bp        

>NTDB_id=174502 A2G56_RS09735 WP_062712117.1 2127585..2128256(+) (comEA/celA/cilE) [Streptococcus halotolerans strain HTS9]
ATGTTTGAGGATATGTTAGAAAAAATCCATACCAACAAAGTTGTCGTGGGACTGGGGGGGTTAGTTATTTTACTGCTGAT
GACATGTCTTTTTCTTTTGAGGAATCCTTCAAAGGAAACTCAGGAAGAGCTTTTACCATCATGGTCAGGACAGTCAGAAA
CCATCAGTAGCACAACGATGCCCTCGAAAGAAGGCTCTCAAGCGGAAAAATCACAATCATCGACGATGATCACGGTTGAT
GTTAAGGGAGCCGTCAAAAAGCCAGGCGTTTATGACTTACCGAGTGGTAGTCGTGTTAATGATGCTATTTTATTGGCAGG
TGGATTAAGAGAAGACGCGGATCGAAAGTCTGTCAATTTTGCTCAAAAATTAAGTGATGAAGGCATTGTTTATGTGGCGA
GTCAGGGTGAAAATATCTCAGTCATAAATTCAAGTGTTGCTCCTCAAAACTCAACGGATTCTTCAGAAGTCTCTACCGGC
AAAGTCGACCTTAATAGGGCTACACTAGCTGATTTACAGACGATTTCTGGTATCGGTCAAAAACGGGCTCAGGACATCAT
AGATTATCGTGATAGCAATGGTGGTTTTAAATCGGTTGATGACCTGTCAAATGTTTCTGGTATTGGTGATAAGACTCTTG
AAAAGCTGCGTGAGGAAGTGACGGTTGATTGA

Domains


Predicted by InterproScan.

(79-125)

(158-221)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae Rx1

49.123

100

0.502

  comEA/celA/cilE Streptococcus pneumoniae D39

49.123

100

0.502

  comEA/celA/cilE Streptococcus pneumoniae R6

49.123

100

0.502

  comEA/celA/cilE Streptococcus pneumoniae TIGR4

47.826

100

0.493

  comEA/celA/cilE Streptococcus mitis NCTC 12261

46.957

100

0.484

  comEA/celA/cilE Streptococcus mitis SK321

46.087

100

0.475

  comEA Streptococcus thermophilus LMD-9

43.644

100

0.462

  comEA Latilactobacillus sakei subsp. sakei 23K

33.878

100

0.372


Multiple sequence alignment