Detailed information NTG0170023

Bioinformatically predicted

Overview

• Name: amiA
• Type: Regulator
• Locus tag: AXE83_RS09075
• Genome accession: NZ_CP014264
• Coordinates: 1948010..1949989 (-)
• Length: 659 a.a.
• NCBI ID: WP_060956210.1
• Uniprot ID: A0A0X8JZF8
• Organism: Streptococcus sp. oral taxon 431 strain F0610 (5-114)
• Function: internalize XIP (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1950313..1951569	1948010..1949989	flank	324

Gene organization within MGE regions

Location: 1948010..1951569

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AXE83_RS09075 (AXE83_09075)	amiA	1948010..1949989 (-)	1980	WP_060956210.1	peptide ABC transporter substrate-binding protein	Regulator
AXE83_RS09085 (AXE83_09085)	-	1950313..1951569 (-)	1257	WP_037612702.1	ISL3 family transposase	-

Sequence

Protein

• Length: 659 a.a.
• Molecular weight: 72770.81 Da
• Isoelectric Point: 4.7737

>NTDB_id=170023 AXE83_RS09075 WP_060956210.1 1948010..1949989(-) (amiA) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MKKSRIFAVAGVALLATGVLAACGSSKSSNAEAPKAYGYVYTADPETLDYLISGKQSTKVVTSNGIDGLFTNDKYGNLTP
AVAEDWSVSQDGLTYTYKIRKGVKWLTADGEEYAEVTANDFVTGLKHAADKKSEALYLAQDSVKGLADYVAGNSTDFSTV
GVKAVDDYTLQYTLNKPEPYWNSKMSYAIFWPLNAEFEKSKGSDFGKSTDPTSLLYNGPFLLKGLTAKSSVEFVKNEQYW
DKDNVHLDTVTLAFYDGSDQESIERNFTSGAYSYARLFPTSSNYSKIAETYKDNIYYTPQGAGIAGLGVNIDRQSYKYTS
KTTDEEKTSTKKALLNKDFRQALNFAFDRTSYSAQLNGEDGAALAVRNLFVKPDFVSAGEKTFGDLVTEKVVSYGDEWKD
VNFADGQDGLYNADKAKAEFAKAKKALEADGVKFPIHLDIPVDQTAKSYIARIQSFKQSVEKVLGEENVVIDIQQVTKDE
LFNITYYAPNAAAEDWDLSGAVGWNPDYQDPSTYLDILQTSNSEQTKTYMGYDNPSNPAVTQVGLKDYDKLLEEAGNETS
DLNKRYEKYAAAQAWLTDSSLFLPAMSSSGAAPVISRVVPFSASYTQSGDKGSDVYFKYLKLQANTVTTKEYKEAREKWL
KEKAESNEKAQKELASHVK

Nucleotide

• Length: 1980 bp

>NTDB_id=170023 AXE83_RS09075 WP_060956210.1 1948010..1949989(-) (amiA) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGAAAAAAAGTCGGATTTTTGCAGTAGCAGGCGTAGCCCTACTTGCAACAGGTGTTCTCGCGGCTTGCGGTTCTTCAAA
ATCATCTAATGCTGAGGCTCCAAAAGCCTACGGATATGTATATACAGCTGATCCAGAAACTTTGGACTACCTTATCTCTG
GTAAGCAAAGTACAAAAGTTGTCACTTCAAATGGTATCGATGGACTCTTTACAAATGATAAATATGGTAACCTCACTCCT
GCAGTTGCAGAAGATTGGTCAGTGTCTCAAGATGGTTTGACATACACTTATAAGATTCGTAAAGGTGTAAAATGGCTCAC
AGCTGATGGTGAAGAATATGCAGAAGTAACTGCTAATGACTTTGTTACAGGTTTGAAACACGCAGCTGATAAGAAATCAG
AAGCATTGTATCTTGCTCAAGATTCTGTAAAAGGTTTGGCAGATTATGTGGCTGGGAACTCAACTGACTTTTCAACTGTT
GGTGTAAAAGCTGTTGATGACTACACTCTTCAATACACTTTGAACAAACCAGAGCCATATTGGAATTCTAAAATGTCTTA
CGCAATCTTCTGGCCTTTGAATGCAGAGTTTGAAAAATCAAAAGGTTCAGACTTTGGTAAGTCAACAGATCCAACATCAT
TGCTTTACAATGGTCCTTTCTTGCTTAAAGGATTAACTGCTAAGTCTTCTGTTGAGTTTGTGAAGAATGAGCAATATTGG
GATAAAGATAATGTTCACTTAGACACTGTGACGCTTGCATTCTATGATGGTTCAGACCAAGAATCAATCGAACGTAACTT
TACAAGTGGTGCATACAGCTACGCCCGTCTCTTCCCAACAAGTTCAAATTATTCTAAAATCGCAGAAACATACAAAGACA
ACATTTACTATACTCCACAAGGAGCTGGTATTGCTGGTTTGGGTGTTAATATTGACCGTCAAAGCTATAAATATACATCA
AAAACAACTGATGAAGAAAAGACTTCTACTAAGAAAGCCCTTCTTAACAAAGACTTCCGTCAAGCTTTGAACTTTGCATT
TGACCGTACATCATACTCTGCTCAGCTGAATGGTGAAGATGGAGCAGCGCTTGCTGTTCGTAACCTATTTGTAAAACCAG
ACTTTGTTTCTGCAGGTGAGAAAACATTTGGTGACTTGGTTACTGAGAAAGTTGTTTCTTATGGTGATGAGTGGAAAGAT
GTAAACTTTGCAGATGGTCAAGATGGTCTTTATAATGCTGATAAAGCGAAAGCAGAATTTGCTAAAGCTAAGAAGGCTTT
GGAAGCAGATGGCGTGAAATTCCCAATTCACTTGGATATTCCAGTTGACCAAACTGCTAAGAGCTACATTGCGCGTATTC
AGTCCTTCAAACAATCTGTTGAAAAAGTTCTTGGTGAAGAAAATGTAGTCATCGATATCCAACAAGTAACAAAAGATGAA
TTATTTAACATCACTTACTATGCTCCGAATGCAGCAGCTGAGGATTGGGATCTTTCAGGTGCCGTTGGATGGAACCCAGA
CTATCAAGACCCATCAACTTACCTTGATATCTTGCAAACAAGTAACAGCGAGCAAACAAAGACTTACATGGGTTATGACA
ATCCATCAAATCCAGCAGTTACCCAAGTTGGTTTGAAAGACTACGACAAGTTGCTTGAAGAAGCTGGTAATGAAACAAGT
GACCTTAACAAACGTTATGAGAAATATGCAGCAGCTCAAGCTTGGTTGACAGATAGCTCCCTCTTCCTTCCAGCTATGTC
ATCTTCAGGAGCAGCGCCAGTTATTTCTCGTGTAGTACCATTCTCGGCCTCTTACACTCAATCTGGTGATAAAGGTTCAG
ATGTATACTTCAAGTACCTTAAATTGCAAGCTAACACTGTAACAACCAAAGAGTACAAAGAAGCTCGTGAAAAATGGCTC
AAAGAAAAAGCTGAATCAAACGAAAAAGCTCAAAAAGAGTTAGCGAGTCATGTGAAATAA

Domains

Predicted by InterproScan.

• Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5) (78-522)

3D structure

• AlphaFold DB: A0A0X8JZF8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiA	Streptococcus salivarius strain HSISS4	67.527	100	0.675
amiA3	Streptococcus thermophilus LMG 18311	67.121	100	0.672
amiA3	Streptococcus thermophilus LMD-9	67.121	100	0.672