Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   AXE83_RS09070 Genome accession   NZ_CP014264
Coordinates   1946448..1947944 (-) Length   498 a.a.
NCBI ID   WP_049528232.1    Uniprot ID   A0A1F0A4K1
Organism   Streptococcus sp. oral taxon 431 strain F0610 (5-114)     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1941448..1952944
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE83_RS09050 (AXE83_09050) - 1942084..1943067 (-) 984 WP_060956206.1 acetylxylan esterase -
  AXE83_RS09055 (AXE83_09055) amiF 1943509..1944435 (-) 927 WP_060956207.1 ATP-binding cassette domain-containing protein Regulator
  AXE83_RS09060 (AXE83_09060) amiE 1944446..1945513 (-) 1068 WP_060956208.1 ABC transporter ATP-binding protein Regulator
  AXE83_RS09065 (AXE83_09065) amiD 1945522..1946448 (-) 927 WP_060956209.1 oligopeptide ABC transporter permease OppC Regulator
  AXE83_RS09070 (AXE83_09070) amiC 1946448..1947944 (-) 1497 WP_049528232.1 ABC transporter permease Regulator
  AXE83_RS09075 (AXE83_09075) amiA 1948010..1949989 (-) 1980 WP_060956210.1 peptide ABC transporter substrate-binding protein Regulator
  AXE83_RS09085 (AXE83_09085) - 1950313..1951569 (-) 1257 WP_037612702.1 ISL3 family transposase -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55783.18 Da        Isoelectric Point: 8.9715

>NTDB_id=170022 AXE83_RS09070 WP_049528232.1 1946448..1947944(-) (amiC) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MKKYVFMRILRSLVSIFLVTTLIYTIIYTMVPRKLIFKQDTNYNKIATTADKRDNYENTVFERMGYIEYYDTKELQEKAS
SIDSSVTVDANDTNKAIYEKYIQQLGNGWTLGEFTESGQFYATREIPIFERVFKFYANLLDIDHTNKIQDPENPNLERYL
RFENDPAIGWSLVGSGTKHKYLLYFNSQFPFVHQNFVNLNLGDSYPTYANTPVLQVITQGQGQTKTSEVQFPTGKKTSSV
NIYSRTYKSPSQADAREVANYGKDDPYTATESNYQYPSMIASSAITGLIGLSISYAIAIPLGSAMARFKNTWIDSFATGT
LTFLLALPTIALVYIIRLIGSSIGFPDSFPILGAGDWRSYVLPAVILGLLGAPTMAIWIRRYMIDLQSQDFVRFARAKGL
SEKEISDKHIFKNAMVPLVSGIPGAIIGVIGGATLTETVFAFPGMGKMLIDSVKASNNNMVVGLVFIFTCVSIFSNLIGD
IWMTIIDPRIKLTEKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=170022 AXE83_RS09070 WP_049528232.1 1946448..1947944(-) (amiC) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGAAAAAATATGTTTTTATGCGTATCTTGCGGTCGTTGGTTTCTATTTTCTTAGTAACGACCTTGATTTACACAATCAT
CTATACGATGGTTCCACGGAAGTTGATCTTCAAACAAGATACTAACTACAATAAAATTGCAACCACAGCTGATAAACGTG
ATAACTATGAAAATACCGTCTTTGAGCGTATGGGTTATATCGAATATTATGATACGAAAGAGTTGCAGGAAAAAGCTAGT
AGCATTGACTCTTCTGTTACAGTAGATGCAAATGATACAAATAAAGCAATCTATGAAAAATATATCCAACAACTTGGGAA
TGGTTGGACTCTAGGTGAGTTTACAGAGAGTGGACAATTCTACGCTACACGTGAAATTCCTATTTTTGAACGTGTGTTTA
AATTCTATGCAAACTTGCTTGATATTGACCATACAAACAAGATCCAAGACCCTGAGAATCCTAACTTAGAGCGTTATTTG
CGCTTTGAGAATGACCCTGCTATCGGTTGGTCTCTTGTGGGTTCAGGTACTAAACACAAATACCTCTTGTACTTCAATAG
TCAGTTCCCATTTGTTCACCAAAACTTTGTCAACTTGAACCTAGGAGATTCTTATCCAACTTATGCAAATACTCCTGTTC
TTCAAGTTATTACACAAGGACAAGGACAAACGAAGACTTCTGAAGTTCAATTCCCAACTGGTAAGAAAACATCATCAGTA
AATATTTACTCAAGAACTTATAAATCTCCGAGTCAAGCTGATGCTCGTGAAGTAGCCAACTACGGTAAAGATGATCCTTA
TACAGCTACTGAGAGCAACTATCAGTACCCATCTATGATTGCAAGTTCTGCTATCACTGGTTTGATTGGTCTTTCGATTT
CATACGCGATTGCGATTCCTCTTGGTTCAGCAATGGCTCGTTTCAAAAACACTTGGATTGATAGTTTCGCTACAGGGACT
CTAACTTTCTTGTTGGCTCTTCCAACGATTGCCCTAGTCTATATTATTCGTTTGATTGGTTCTTCAATCGGCTTCCCAGA
CTCATTCCCAATCTTGGGTGCTGGTGATTGGCGTTCTTATGTCCTTCCTGCTGTGATTTTGGGCTTGTTAGGAGCACCTA
CTATGGCAATTTGGATTCGCCGTTATATGATTGACTTGCAATCACAAGATTTCGTTCGTTTTGCTCGTGCAAAAGGTTTG
TCTGAGAAAGAGATTTCTGATAAGCATATCTTTAAAAATGCTATGGTACCACTTGTTTCTGGTATTCCAGGTGCTATCAT
TGGTGTTATTGGTGGAGCAACTCTTACAGAAACAGTCTTCGCCTTCCCAGGTATGGGTAAAATGTTGATCGACTCTGTAA
AGGCTTCAAACAATAATATGGTAGTTGGTCTTGTCTTTATCTTCACTTGTGTCTCAATCTTCTCAAACCTTATTGGTGAT
ATTTGGATGACGATTATTGACCCACGTATTAAATTGACAGAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1F0A4K1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

76.506

100

0.765
  amiC Streptococcus thermophilus LMG 18311

76.305

100

0.763
  amiC Streptococcus thermophilus LMD-9

75.904

100

0.759

Multiple sequence alignment