Detailed information NTG0170019

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: AXE83_RS09055
• Genome accession: NZ_CP014264
• Coordinates: 1943509..1944435 (-)
• Length: 308 a.a.
• NCBI ID: WP_060956207.1
• Uniprot ID: A0A109W984
• Organism: Streptococcus sp. oral taxon 431 strain F0610 (5-114)
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1938509..1949435

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AXE83_RS09050 (AXE83_09050)	-	1942084..1943067 (-)	984	WP_060956206.1	acetylxylan esterase	-
AXE83_RS09055 (AXE83_09055)	amiF	1943509..1944435 (-)	927	WP_060956207.1	ATP-binding cassette domain-containing protein	Regulator
AXE83_RS09060 (AXE83_09060)	amiE	1944446..1945513 (-)	1068	WP_060956208.1	ABC transporter ATP-binding protein	Regulator
AXE83_RS09065 (AXE83_09065)	amiD	1945522..1946448 (-)	927	WP_060956209.1	oligopeptide ABC transporter permease OppC	Regulator
AXE83_RS09070 (AXE83_09070)	amiC	1946448..1947944 (-)	1497	WP_049528232.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34991.16 Da
• Isoelectric Point: 6.8599

>NTDB_id=170019 AXE83_RS09055 WP_060956207.1 1943509..1944435(-) (amiF) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MSEKLVEIKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSKGDIIFEGKKINGKKSRE
QASELIRRIQMIFQDPAASLNERATVDYIISEGLYNYHLFKDEEERKEKVQNIIREVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMQPDFVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
NPVHPYTQALLSAVPIPDPILERKKVLKVYDPDQHNYETDKPSMVEIRPGHYVWANQAELERYKKDLK

Nucleotide

• Length: 927 bp

>NTDB_id=170019 AXE83_RS09055 WP_060956207.1 1943509..1944435(-) (amiF) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGTCTGAAAAATTAGTAGAAATTAAAGACTTAGAAATTTCCTTCGGTGAAGGAAGCAAAAAGTTTGTCGCTGTTAAAAA
TGCGAACTTCTTTATCAACAAAGGAGAAACTTTCTCACTTGTTGGAGAGTCTGGTAGTGGTAAGACAACAATTGGTCGTG
CTATTATCGGTCTTAATGATACCAGCAAAGGTGATATCATCTTTGAAGGTAAAAAAATTAATGGTAAAAAATCACGTGAA
CAAGCTTCGGAATTAATTCGTCGTATCCAAATGATTTTCCAGGACCCTGCTGCAAGTTTGAATGAACGTGCAACAGTTGA
CTATATCATTTCTGAAGGTCTTTATAACTACCATTTATTTAAAGATGAAGAAGAAAGAAAAGAAAAAGTTCAAAATATCA
TTCGTGAAGTGGGACTTTTGGCTGAACACTTGACACGTTACCCACATGAGTTCTCAGGTGGACAACGTCAACGTATCGGG
ATTGCCCGTGCCTTGGTTATGCAACCTGACTTCGTTATTGCGGATGAGCCAATTTCAGCCTTGGACGTTTCAGTACGTGC
CCAAGTTTTGAACTTGCTCAAGAAATTCCAAAAAGAATTAGGATTGACTTATCTCTTTATCGCCCACGATTTGTCAGTAG
TTCGTTTCATTTCTGATCGTATTGCGGTAATTTATAAGGGTGTCATTGTTGAAGTGGCTGAAACTGAAGAATTGTTTAAC
AATCCAGTTCATCCATACACGCAAGCACTTCTATCAGCTGTTCCTATTCCAGACCCAATCTTGGAACGTAAAAAAGTTTT
GAAAGTCTATGATCCAGATCAACATAACTATGAAACTGATAAGCCTTCTATGGTAGAAATTCGTCCAGGTCACTATGTTT
GGGCAAACCAAGCAGAGTTGGAACGCTATAAAAAAGATTTGAAATAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

3D structure

• AlphaFold DB: A0A109W984

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	84.967	99.351	0.844
amiF	Streptococcus salivarius strain HSISS4	84.967	99.351	0.844
amiF	Streptococcus thermophilus LMD-9	84.641	99.351	0.841