Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   AXE83_RS09060 Genome accession   NZ_CP014264
Coordinates   1944446..1945513 (-) Length   355 a.a.
NCBI ID   WP_060956208.1    Uniprot ID   A0A0X8JZG2
Organism   Streptococcus sp. oral taxon 431 strain F0610 (5-114)     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1939446..1950513
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE83_RS09050 (AXE83_09050) - 1942084..1943067 (-) 984 WP_060956206.1 acetylxylan esterase -
  AXE83_RS09055 (AXE83_09055) amiF 1943509..1944435 (-) 927 WP_060956207.1 ATP-binding cassette domain-containing protein Regulator
  AXE83_RS09060 (AXE83_09060) amiE 1944446..1945513 (-) 1068 WP_060956208.1 ABC transporter ATP-binding protein Regulator
  AXE83_RS09065 (AXE83_09065) amiD 1945522..1946448 (-) 927 WP_060956209.1 oligopeptide ABC transporter permease OppC Regulator
  AXE83_RS09070 (AXE83_09070) amiC 1946448..1947944 (-) 1497 WP_049528232.1 ABC transporter permease Regulator
  AXE83_RS09075 (AXE83_09075) amiA 1948010..1949989 (-) 1980 WP_060956210.1 peptide ABC transporter substrate-binding protein Regulator

Sequence

Protein


Download         Length: 355 a.a.        Molecular weight: 39621.31 Da        Isoelectric Point: 4.8173

>NTDB_id=170020 AXE83_RS09060 WP_060956208.1 1944446..1945513(-) (amiE) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MIKGKNVILTAQDIVVEFDVRDKILTAIRGVSIDLIEGEVLALVGESGSGKSVLTKTFTGMLEENGRIAQGSINYRGQDL
TTLSSHKEWESIRGAKIATIFQDPMTSLDPIKTIGSQITEVIVKHQGKTAQEAKEMAIDYMNKVGIPDSEKRFDEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIDLLKSLQHEYHFTTIFITHDLGVVASIADKVAVMYAGEIIE
YGTVEEIFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYTELKGDAFALRSDYAMKIDFEEKAPQFAVSDTHWAK
TWLLHEQAPKVEKPSVIADLHDKIREKMGFTHLED

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=170020 AXE83_RS09060 WP_060956208.1 1944446..1945513(-) (amiE) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGATAAAAGGAAAAAATGTAATTTTGACTGCTCAAGATATTGTCGTGGAATTTGATGTTCGTGACAAGATTTTGACAGC
TATTCGAGGTGTCTCCATCGATTTGATTGAGGGAGAGGTCCTCGCCTTAGTTGGGGAGTCAGGCTCAGGTAAATCAGTTT
TGACAAAAACATTCACAGGAATGTTGGAAGAAAATGGTCGCATTGCACAAGGAAGTATTAATTACCGTGGACAAGATTTG
ACAACCTTATCTTCTCATAAAGAATGGGAAAGTATTCGTGGTGCGAAGATTGCAACTATCTTCCAAGATCCGATGACCAG
TCTAGACCCAATCAAGACAATCGGAAGTCAAATCACAGAAGTTATTGTTAAACACCAAGGCAAGACTGCTCAAGAAGCTA
AAGAGATGGCTATTGACTATATGAATAAAGTTGGTATTCCAGATTCTGAGAAACGTTTTGACGAGTATCCTTTCCAATAT
TCTGGGGGAATGCGTCAACGTATTGTTATCGCGATTGCTCTTGCCTGTCGTCCAGACATTCTTATCTGTGATGAGCCGAC
AACAGCTCTTGACGTGACCATTCAGGCACAGATTATTGATTTGTTGAAGTCACTTCAACACGAATACCACTTTACAACAA
TCTTTATCACCCACGACCTAGGTGTAGTAGCAAGTATCGCTGATAAAGTTGCGGTTATGTATGCTGGTGAAATCATCGAG
TATGGTACTGTTGAAGAAATCTTCTACGACCCACGTCATCCATATACGTGGAGCCTCTTGTCAAGCTTGCCTCAACTTGC
GGATGACAAAGGTGAATTGTACTCAATCCCTGGAACACCTCCATCGCTTTATACTGAATTGAAGGGAGATGCTTTTGCTC
TTCGTTCAGATTATGCTATGAAGATTGACTTTGAGGAAAAAGCACCTCAGTTTGCAGTATCTGATACTCATTGGGCTAAG
ACATGGTTGCTTCATGAACAAGCTCCAAAAGTTGAAAAACCATCGGTGATTGCAGATTTACACGACAAGATTCGTGAAAA
GATGGGCTTTACACATCTTGAGGACTAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(29-187)

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(239-301)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0X8JZG2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

86.197

100

0.862
  amiE Streptococcus thermophilus LMG 18311

84.225

100

0.842
  amiE Streptococcus thermophilus LMD-9

84.225

100

0.842
  oppD Streptococcus mutans UA159

53.448

98.028

0.524

Multiple sequence alignment