Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AL538_RS15160 | Genome accession | NZ_CP014038 |
| Coordinates | 3031071..3031370 (+) | Length | 99 a.a. |
| NCBI ID | WP_005446580.1 | Uniprot ID | A0A3A1QB85 |
| Organism | Vibrio harveyi strain FDAARGOS_107 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3026071..3036370
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL538_RS15150 (AL538_14265) | - | 3028578..3028850 (+) | 273 | WP_005430934.1 | HU family DNA-binding protein | - |
| AL538_RS15155 (AL538_14270) | ppiD | 3029066..3030925 (+) | 1860 | WP_009698342.1 | peptidylprolyl isomerase | - |
| AL538_RS15160 (AL538_14275) | comEA | 3031071..3031370 (+) | 300 | WP_005446580.1 | ComEA family DNA-binding protein | Machinery gene |
| AL538_RS15165 (AL538_14280) | rrtA | 3031523..3032074 (-) | 552 | WP_017818999.1 | rhombosortase | - |
| AL538_RS15170 (AL538_14285) | - | 3032078..3032695 (+) | 618 | WP_005446584.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| AL538_RS15175 (AL538_14290) | - | 3032746..3034080 (-) | 1335 | WP_061065710.1 | anti-phage deoxyguanosine triphosphatase | - |
| AL538_RS15180 (AL538_14295) | yfbR | 3034084..3034668 (-) | 585 | WP_005425568.1 | 5'-deoxynucleotidase | - |
| AL538_RS15185 (AL538_14300) | - | 3034752..3035966 (-) | 1215 | WP_005446588.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10936.80 Da Isoelectric Point: 8.9385
>NTDB_id=167801 AL538_RS15160 WP_005446580.1 3031071..3031370(+) (comEA) [Vibrio harveyi strain FDAARGOS_107]
MKWMLTLCLLLLAPMSWAEESKSANTKAAKYEGIEITVNVNTASAQEIATMLKGIGEKKAKDIVEYRNEHGPFKTVADLT
KVKGIGDATVKKNEERILL
MKWMLTLCLLLLAPMSWAEESKSANTKAAKYEGIEITVNVNTASAQEIATMLKGIGEKKAKDIVEYRNEHGPFKTVADLT
KVKGIGDATVKKNEERILL
Nucleotide
Download Length: 300 bp
>NTDB_id=167801 AL538_RS15160 WP_005446580.1 3031071..3031370(+) (comEA) [Vibrio harveyi strain FDAARGOS_107]
ATGAAATGGATGTTAACACTGTGCTTATTACTCTTAGCACCGATGAGCTGGGCAGAAGAGAGTAAGTCGGCTAACACAAA
AGCAGCTAAGTACGAAGGTATCGAGATTACGGTAAACGTAAATACAGCTTCAGCGCAAGAGATTGCCACCATGCTAAAGG
GTATTGGTGAGAAAAAAGCGAAAGATATCGTCGAATATCGTAATGAACACGGTCCTTTTAAAACCGTTGCGGATCTGACC
AAAGTGAAGGGCATTGGCGATGCCACGGTGAAAAAGAATGAAGAGCGTATTTTGTTGTAA
ATGAAATGGATGTTAACACTGTGCTTATTACTCTTAGCACCGATGAGCTGGGCAGAAGAGAGTAAGTCGGCTAACACAAA
AGCAGCTAAGTACGAAGGTATCGAGATTACGGTAAACGTAAATACAGCTTCAGCGCAAGAGATTGCCACCATGCTAAAGG
GTATTGGTGAGAAAAAAGCGAAAGATATCGTCGAATATCGTAATGAACACGGTCCTTTTAAAACCGTTGCGGATCTGACC
AAAGTGAAGGGCATTGGCGATGCCACGGTGAAAAAGAATGAAGAGCGTATTTTGTTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio campbellii strain DS40M4 |
82.828 |
100 |
0.828 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
75.758 |
100 |
0.758 |
| comEA | Vibrio cholerae C6706 |
56.566 |
100 |
0.566 |
| comEA | Vibrio cholerae strain A1552 |
56.566 |
100 |
0.566 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
41.071 |
100 |
0.465 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
39.252 |
100 |
0.424 |
| comEA | Legionella pneumophila str. Paris |
37.374 |
100 |
0.374 |
| comEA | Legionella pneumophila strain ERS1305867 |
37.374 |
100 |
0.374 |