Detailed information NTG0165984

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: AUC44_RS14305
• Genome accession: NZ_CP013910
• Coordinates: 2909545..2910696 (-)
• Length: 383 a.a.
• NCBI ID: WP_157445392.1
• Uniprot ID: -
• Organism: Deinococcus actinosclerus strain BM2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2904545..2915696

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AUC44_RS14275 (AUC44_14255)	-	2904649..2905551 (+)	903	WP_062159315.1	MBL fold metallo-hydrolase	-
AUC44_RS14280 (AUC44_14260)	-	2905600..2906217 (+)	618	WP_062159316.1	Dps family protein	-
AUC44_RS14285 (AUC44_14265)	-	2906303..2906794 (+)	492	WP_062159317.1	DUF4385 domain-containing protein	-
AUC44_RS14290 (AUC44_14270)	mobA	2906828..2907394 (-)	567	WP_062159318.1	molybdenum cofactor guanylyltransferase	-
AUC44_RS14295 (AUC44_14275)	-	2907391..2908836 (-)	1446	WP_062159319.1	aldehyde dehydrogenase family protein	-
AUC44_RS14300 (AUC44_14280)	-	2909028..2909465 (+)	438	WP_062159320.1	hypothetical protein	-
AUC44_RS14305 (AUC44_14285)	pilD	2909545..2910696 (-)	1152	WP_157445392.1	prepilin peptidase	Machinery gene
AUC44_RS14310 (AUC44_14290)	-	2910775..2911284 (-)	510	WP_062159322.1	hypothetical protein	-
AUC44_RS14315 (AUC44_14295)	rimO	2911416..2912906 (-)	1491	WP_062159878.1	30S ribosomal protein S12 methylthiotransferase RimO	-
AUC44_RS14320 (AUC44_14300)	-	2913015..2914892 (-)	1878	WP_062159323.1	alpha/beta hydrolase	-

Sequence

Protein

• Length: 383 a.a.
• Molecular weight: 40307.71 Da
• Isoelectric Point: 8.0313

>NTDB_id=165984 AUC44_RS14305 WP_157445392.1 2909545..2910696(-) (pilD) [Deinococcus actinosclerus strain BM2]
MTPDVLLVIFAGLLGLLVGSFSNVLIWRLPRGENIAFPPSHCPNCDHRLGVTDLVPVFSWLSLGGKCRYCRAPIKARYPV
VELLTGIGYAAIAALFPPLTVGWGALGLMVLFTILLVGSAIDLDTYTIPDELTLPGVALGVLFGLLNGRAGVEGLPDLAG
AVQGALLGAGVVVAINQFGSWVLRRFRERAFPEFPIGYQQISLALLAGAWLGPWWGAGVGLLSALVNVAARRVIRMPELL
TLGGLLVSVMLGSAGYGPGMILMVQGALAAAGAVSLACGVYWWLHWRRHREDDGAADDTQVDASAMGFGDVKLAAVIGAF
LGWERLLLALVVAVFAGAIFGVAQLALRSENRVKFGPFLALGAVVALLWGASLIGSYRAMLGL

Nucleotide

• Length: 1152 bp

>NTDB_id=165984 AUC44_RS14305 WP_157445392.1 2909545..2910696(-) (pilD) [Deinococcus actinosclerus strain BM2]
GTGACCCCTGACGTCCTTCTCGTGATCTTCGCCGGGCTGCTGGGCCTGCTGGTGGGTTCGTTCTCGAATGTGCTCATCTG
GCGGCTGCCGCGCGGGGAGAACATCGCGTTCCCGCCCAGCCACTGCCCGAACTGCGACCACCGCCTGGGCGTCACCGATC
TCGTGCCCGTGTTCTCCTGGCTGAGCCTGGGCGGGAAGTGCCGCTACTGCAGGGCCCCCATCAAGGCTCGCTACCCGGTG
GTGGAACTCCTGACCGGGATCGGGTACGCGGCCATCGCGGCGCTGTTTCCGCCGCTGACGGTCGGCTGGGGCGCGCTGGG
CCTGATGGTGCTGTTCACGATCCTGCTCGTCGGCAGCGCCATCGACCTGGACACCTACACCATCCCCGACGAACTGACCC
TGCCCGGCGTGGCGCTGGGCGTGCTGTTCGGCCTCCTGAACGGGCGGGCGGGCGTGGAGGGCCTTCCGGACCTTGCGGGC
GCGGTGCAGGGGGCGCTGCTGGGGGCCGGGGTGGTCGTGGCGATCAACCAGTTCGGGTCGTGGGTGCTGCGCCGCTTCCG
CGAGCGGGCCTTCCCGGAGTTCCCCATCGGGTACCAGCAGATCAGCCTCGCGCTGCTGGCCGGCGCGTGGCTGGGGCCGT
GGTGGGGGGCGGGCGTGGGCCTGCTGTCCGCCCTGGTGAACGTCGCCGCCCGCCGCGTGATCCGCATGCCGGAACTGCTC
ACGCTGGGCGGCCTGCTCGTCAGCGTGATGCTGGGTAGCGCCGGGTACGGCCCCGGCATGATCCTGATGGTGCAGGGCGC
ACTTGCGGCCGCCGGGGCGGTGTCGCTCGCCTGCGGCGTGTACTGGTGGCTCCACTGGCGCCGCCACCGCGAGGACGACG
GCGCGGCGGACGACACGCAGGTGGACGCCAGCGCGATGGGTTTCGGGGACGTGAAACTGGCCGCCGTGATCGGCGCGTTC
CTGGGCTGGGAGCGGCTGCTGCTGGCGCTGGTCGTCGCGGTGTTCGCCGGGGCGATCTTCGGGGTGGCGCAGCTCGCCCT
GCGCAGCGAGAACCGCGTGAAGTTCGGGCCGTTCCTCGCGCTGGGCGCCGTGGTGGCCCTGCTGTGGGGCGCCTCGCTGA
TCGGCAGTTACCGCGCGATGCTGGGACTGTAG

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (13-94)

• Type IV leader peptidase family (Peptidase_A24) (235-342)

• Type IV leader peptidase family (Peptidase_A24) (109-224)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	74.036	100	0.752