Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   AV644_RS03390 Genome accession   NZ_CP013908
Coordinates   596359..596547 (+) Length   62 a.a.
NCBI ID   WP_000027835.1    Uniprot ID   A0AAV3JNT7
Organism   Streptococcus agalactiae strain GBS-M002     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 591359..601547
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AV644_RS03365 (AV644_03245) - 591837..593213 (+) 1377 WP_000594351.1 ABC transporter permease -
  AV644_RS03370 (AV644_03250) - 593310..593963 (+) 654 WP_000699093.1 response regulator transcription factor -
  AV644_RS03375 (AV644_03255) - 593960..595261 (+) 1302 WP_000734168.1 sensor histidine kinase -
  AV644_RS03380 (AV644_03260) - 595313..595960 (-) 648 Protein_566 IS3 family transposase -
  AV644_RS03385 (AV644_03265) - 596138..596317 (+) 180 WP_000076709.1 CsbD family protein -
  AV644_RS03390 (AV644_03270) prx 596359..596547 (+) 189 WP_000027835.1 hypothetical protein Regulator
  AV644_RS03395 (AV644_03275) - 596972..598177 (+) 1206 WP_000078931.1 FtsW/RodA/SpoVE family cell cycle protein -
  AV644_RS03400 (AV644_03280) - 598296..598856 (+) 561 WP_001106189.1 HAD-IA family hydrolase -
  AV644_RS03405 (AV644_03285) gyrB 598857..600809 (+) 1953 WP_000134196.1 DNA topoisomerase (ATP-hydrolyzing) subunit B -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7180.25 Da        Isoelectric Point: 4.7815

>NTDB_id=165929 AV644_RS03390 WP_000027835.1 596359..596547(+) (prx) [Streptococcus agalactiae strain GBS-M002]
MSIRTDIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLLHEEVREEEVVTVERVLDVLRKLS

Nucleotide


Download         Length: 189 bp        

>NTDB_id=165929 AV644_RS03390 WP_000027835.1 596359..596547(+) (prx) [Streptococcus agalactiae strain GBS-M002]
TTGTCTATCAGAACAGATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGT
GCGTAAAAACGGAAAGATATTTGATTATGTGTTACTACACGAAGAAGTGAGAGAAGAAGAGGTTGTTACAGTTGAGAGAG
TGCTTGATGTACTGAGGAAGTTATCATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

72.222

87.097

0.629
  prx Streptococcus pyogenes MGAS8232

69.091

88.71

0.613
  prx Streptococcus pyogenes MGAS315

66.667

87.097

0.581
  prx Streptococcus pyogenes MGAS315

85

64.516

0.548
  prx Streptococcus pyogenes MGAS315

61.818

88.71

0.548
  prx Streptococcus pyogenes MGAS315

74.359

62.903

0.468
  prx Streptococcus pyogenes MGAS315

78.378

59.677

0.468

Multiple sequence alignment