Detailed information NTG0165067

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: BEN15_RS06580
• Genome accession: NZ_CP016877
• Coordinates: 1231819..1233972 (-)
• Length: 717 a.a.
• NCBI ID: WP_065973042.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain KLDS 3.1003
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1226819..1238972

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BEN15_RS06560 (BEN15_06555)	-	1227710..1228051 (+)	342	WP_024404826.1	LytR/AlgR family response regulator transcription factor	-
BEN15_RS06565 (BEN15_06560)	comE/blpR	1228053..1228793 (+)	741	WP_065973040.1	response regulator transcription factor	Regulator
BEN15_RS06570 (BEN15_06565)	-	1228804..1230144 (+)	1341	WP_039671036.1	sensor histidine kinase	-
BEN15_RS11035	-	1230192..1230347 (-)	156	WP_096811960.1	ComC/BlpC family leader-containing pheromone/bacteriocin	-
BEN15_RS06575 (BEN15_06570)	comB	1230446..1231807 (-)	1362	WP_065973041.1	bacteriocin secretion accessory protein	Regulator
BEN15_RS06580 (BEN15_06575)	comA/nlmT	1231819..1233972 (-)	2154	WP_065973042.1	peptide cleavage/export ABC transporter	Regulator
BEN15_RS06585 (BEN15_06580)	-	1234269..1234523 (+)	255	WP_039671033.1	Blp family class II bacteriocin	-
BEN15_RS06590 (BEN15_06585)	-	1234538..1234741 (+)	204	WP_039671032.1	Blp family class II bacteriocin	-
BEN15_RS10455	-	1235255..1235533 (-)	279	Protein_1219	transposase	-
BEN15_RS06600 (BEN15_06595)	-	1235741..1236845 (-)	1105	Protein_1220	IS3 family transposase	-
BEN15_RS06610 (BEN15_06605)	-	1237536..1237742 (+)	207	WP_065973044.1	Blp family class II bacteriocin	-
BEN15_RS06615 (BEN15_06610)	-	1237783..1237971 (+)	189	WP_039671028.1	hypothetical protein	-
BEN15_RS06620 (BEN15_06615)	-	1238681..1238938 (+)	258	WP_039671027.1	Blp family class II bacteriocin	-

Sequence

Protein

• Length: 717 a.a.
• Molecular weight: 80547.42 Da
• Isoelectric Point: 7.1129

>NTDB_id=165067 BEN15_RS06580 WP_065973042.1 1231819..1233972(-) (comA/nlmT) [Streptococcus thermophilus strain KLDS 3.1003]
MTSYKRTFVPQIDARDCGVAALASIAKFYGSDYSLAHLRELAKTNKEGTTALGIVKAAQEIGFETRAIQADMSLFDMNDV
PYPFIVHVNKEGKLQHYYVVYQTKKDHLIIGDPDPTVKVTKMSKERFSSEWTGVAIFLAPEPSYKPHKDKKNGLMSFLPL
IFRQRALIFYIVLASLLVTLINIGGSYYLQGILDEYIPNQMKSTLGIISIGLIITYILQQMMSFSRDYLLTVLSQRLSID
VILSYIRHIFELPMSFFATRRTGEVISRFTDANSIIDALASTILSLFLDVSILTIVGGVLLVQNTNLFLLSLISVPIYII
IIFAFMKPFEKMNNDVMQSNSMVSSAIIEDINGIETIKSLTSEESRYQKIDSEFVDYLDKSFKLSKYSILQTTLKQGAQL
ILNIVILWFGAQLVMNGHISVGQLITFNTLLSYFTNPLENIINLQTKLQSAKVANNRLNEVYLVESEFSNSQTLTDSQFL
TGDIRFEDLSYKYGFGRDTLSDINLTIKQGDKVSLVGISGSGKTTLAKMIVNFFEPYKGRITINNNDLKLVDKKTLRQHI
NYLPQQAYIFNGSILENLTLGANQMISQEDIIKACDIAEIRQDIEQMPMGYQTELSDGAGLSGGQKQRIALARALLTKAP
VLILDEATSGLDVLTEKKVIDNLMAMTDKTIIFVAHRLSISERTNQVIVLDQGKVIETGSHQELMLKQGFYHHLFSK

Nucleotide

• Length: 2154 bp

>NTDB_id=165067 BEN15_RS06580 WP_065973042.1 1231819..1233972(-) (comA/nlmT) [Streptococcus thermophilus strain KLDS 3.1003]
ATGACCTCTTATAAACGAACCTTTGTTCCTCAAATTGATGCCAGAGACTGTGGTGTAGCTGCTTTAGCTTCTATTGCCAA
GTTTTACGGTTCTGACTATTCTCTAGCTCATTTGAGAGAATTAGCCAAAACTAACAAGGAAGGAACAACCGCACTTGGTA
TCGTTAAAGCTGCCCAAGAAATAGGCTTTGAGACAAGAGCCATCCAAGCTGATATGAGCCTTTTTGATATGAATGATGTC
CCTTACCCTTTCATCGTTCACGTCAATAAAGAAGGAAAGCTCCAACACTACTATGTAGTGTATCAAACCAAAAAAGATCA
TCTTATCATTGGTGATCCTGACCCTACAGTCAAGGTGACAAAGATGTCCAAGGAGCGATTTTCTTCTGAATGGACTGGTG
TAGCCATTTTTCTAGCTCCAGAGCCTAGCTACAAACCTCATAAGGATAAAAAGAACGGCCTGATGAGTTTTCTCCCTCTG
ATTTTCAGGCAACGTGCGCTTATCTTTTATATCGTCTTGGCTAGCCTTTTGGTGACGCTTATCAATATTGGTGGTTCTTA
CTACCTGCAAGGGATTTTGGATGAATACATTCCTAATCAAATGAAGTCAACCTTGGGGATTATCTCCATCGGCTTGATTA
TCACCTACATCCTCCAGCAGATGATGAGTTTCTCACGAGATTACCTTTTGACTGTGCTCAGCCAGCGGCTAAGTATTGAT
GTGATTCTTTCCTATATCCGTCATATCTTTGAACTGCCCATGTCCTTCTTTGCGACGCGGCGGACTGGTGAGGTTATCTC
TCGCTTTACAGATGCCAATTCAATCATTGATGCCCTGGCATCGACCATTTTGTCACTCTTCCTTGATGTCTCTATTTTGA
CCATCGTCGGTGGTGTGCTTTTGGTACAAAACACCAACCTCTTCCTGCTCTCCTTAATTTCAGTTCCCATTTACATCATC
ATTATTTTTGCTTTTATGAAGCCGTTTGAGAAGATGAATAACGATGTTATGCAGAGCAATTCCATGGTCAGCTCTGCCAT
TATCGAAGACATCAACGGCATTGAAACCATCAAATCCTTGACCAGCGAAGAAAGCCGCTACCAGAAGATTGATAGCGAGT
TCGTAGATTACCTGGACAAATCCTTCAAACTCAGTAAATACTCTATCCTGCAAACTACCCTTAAACAGGGAGCTCAGCTC
ATTCTAAATATCGTCATCTTGTGGTTTGGGGCTCAACTAGTCATGAACGGACACATTTCAGTTGGACAACTGATCACCTT
CAACACCCTTCTATCTTATTTTACCAATCCTTTAGAAAATATTATAAACCTCCAAACCAAGCTCCAGTCTGCCAAGGTGG
CTAACAATCGCCTGAATGAAGTCTACCTGGTTGAATCTGAATTCAGTAACAGTCAGACCTTAACAGATTCACAGTTCCTG
ACTGGCGATATTCGCTTTGAAGACCTTTCCTATAAGTACGGTTTCGGACGTGACACCCTATCTGATATCAATCTGACCAT
CAAACAGGGCGATAAGGTCAGTCTAGTAGGAATTAGCGGCTCAGGAAAGACAACCTTGGCCAAGATGATTGTCAACTTCT
TTGAGCCTTACAAGGGTCGAATCACCATCAACAACAATGACCTTAAACTGGTTGATAAAAAGACGCTTCGGCAACACATC
AACTATCTTCCCCAACAAGCTTATATCTTTAATGGTTCAATCTTAGAAAACCTGACCTTGGGTGCCAATCAAATGATCAG
CCAAGAAGATATTATCAAAGCTTGCGACATTGCCGAGATACGCCAAGACATCGAACAAATGCCTATGGGGTATCAGACAG
AATTATCAGATGGAGCTGGTTTATCAGGTGGTCAAAAACAGCGTATTGCTTTAGCTAGAGCTTTACTGACAAAGGCTCCT
GTTCTTATTCTTGATGAAGCAACCAGCGGTCTTGATGTTTTAACGGAGAAAAAGGTCATTGATAATCTGATGGCTATGAC
AGACAAGACTATTATCTTTGTCGCTCACCGCCTTAGTATTTCTGAACGAACCAATCAAGTCATTGTACTTGACCAAGGGA
AGGTCATTGAGACTGGTTCACATCAGGAATTAATGCTCAAGCAAGGTTTCTACCATCATCTATTTAGCAAGTAA

Domains

Predicted by InterProScan.

• ABC transporter transmembrane region (ABC_membrane) (168-438)

• ABC transporter (ABC_tran) (500-649)

• Peptidase C39 family (Peptidase_C39) (7-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	73.706	99.721	0.735
comA	Streptococcus mitis NCTC 12261	68.214	99.163	0.676
comA	Streptococcus pneumoniae Rx1	67.651	99.163	0.671
comA	Streptococcus pneumoniae D39	67.651	99.163	0.671
comA	Streptococcus pneumoniae R6	67.651	99.163	0.671
comA	Streptococcus mitis SK321	67.651	99.163	0.671
comA	Streptococcus pneumoniae TIGR4	67.37	99.163	0.668
comA	Streptococcus gordonii str. Challis substr. CH1	65.734	99.721	0.656