Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | AU077_RS01850 | Genome accession | NZ_CP013688 |
| Coordinates | 363146..363736 (+) | Length | 196 a.a. |
| NCBI ID | WP_058621449.1 | Uniprot ID | - |
| Organism | Streptococcus gallolyticus strain ICDDRB-NRC-S1 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 358146..368736
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AU077_RS01835 (AU077_01835) | - | 358306..359469 (+) | 1164 | WP_058621447.1 | MalY/PatB family protein | - |
| AU077_RS01840 (AU077_01840) | - | 359637..362219 (+) | 2583 | WP_058621448.1 | glycoside hydrolase family 68 protein | - |
| AU077_RS01845 (AU077_01845) | upp | 362395..363024 (+) | 630 | WP_018364215.1 | uracil phosphoribosyltransferase | - |
| AU077_RS01850 (AU077_01850) | clpP | 363146..363736 (+) | 591 | WP_058621449.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| AU077_RS01855 (AU077_01855) | - | 363838..364281 (+) | 444 | WP_058621450.1 | YlbF family regulator | - |
| AU077_RS01860 (AU077_01860) | - | 364274..364525 (+) | 252 | WP_009854761.1 | YlbG family protein | - |
| AU077_RS01865 (AU077_01865) | - | 364638..365819 (+) | 1182 | WP_058621451.1 | ABC transporter substrate-binding protein | - |
| AU077_RS01870 (AU077_01870) | - | 365871..366755 (+) | 885 | WP_014295094.1 | branched-chain amino acid ABC transporter permease | - |
| AU077_RS01875 (AU077_01875) | - | 366759..367712 (+) | 954 | WP_014295093.1 | branched-chain amino acid ABC transporter permease | - |
| AU077_RS01880 (AU077_01880) | - | 367712..368476 (+) | 765 | WP_058621452.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21496.42 Da Isoelectric Point: 4.3383
>NTDB_id=164037 AU077_RS01850 WP_058621449.1 363146..363736(+) (clpP) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRQNLEQILADNSGQ
SLEKVHADAERDNWMSAQETLEYGFIDEIMVNNELN
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRQNLEQILADNSGQ
SLEKVHADAERDNWMSAQETLEYGFIDEIMVNNELN
Nucleotide
Download Length: 591 bp
>NTDB_id=164037 AU077_RS01850 WP_058621449.1 363146..363736(+) (clpP) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
ATGATTCCTGTAGTTATTGAACAAACGAGCCGTGGCGAACGCTCATATGATATTTATTCTCGCCTTTTGAAAGACCGCAT
TATCATGTTGACTGGTCCAGTTGAGGATAATATGGCAAACTCAATTATTGCTCAGCTATTATTCTTGGATGCCCAAGACA
ATACCAAAGATATTTATCTTTATGTTAATACACCTGGTGGTTCTGTCTCAGCAGGGCTTGCTATTGTGGATACTATGAAC
TTCATTAAATCTGATGTTCAAACTATCGTTATGGGTATGGCAGCATCAATGGGTACAGTTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGCGGTACTCAACAAA
GCGATATGGCTATCGCTGCTGAACACCTTTTGAAAACACGTCAAAACTTGGAACAAATTTTGGCTGACAACTCAGGTCAA
AGTTTGGAAAAAGTTCACGCTGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATCGA
TGAAATTATGGTTAACAACGAATTGAACTAA
ATGATTCCTGTAGTTATTGAACAAACGAGCCGTGGCGAACGCTCATATGATATTTATTCTCGCCTTTTGAAAGACCGCAT
TATCATGTTGACTGGTCCAGTTGAGGATAATATGGCAAACTCAATTATTGCTCAGCTATTATTCTTGGATGCCCAAGACA
ATACCAAAGATATTTATCTTTATGTTAATACACCTGGTGGTTCTGTCTCAGCAGGGCTTGCTATTGTGGATACTATGAAC
TTCATTAAATCTGATGTTCAAACTATCGTTATGGGTATGGCAGCATCAATGGGTACAGTTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGCGGTACTCAACAAA
GCGATATGGCTATCGCTGCTGAACACCTTTTGAAAACACGTCAAAACTTGGAACAAATTTTGGCTGACAACTCAGGTCAA
AGTTTGGAAAAAGTTCACGCTGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATCGA
TGAAATTATGGTTAACAACGAATTGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
95.385 |
99.49 |
0.949 |
| clpP | Streptococcus thermophilus LMD-9 |
95.385 |
99.49 |
0.949 |
| clpP | Streptococcus pneumoniae Rx1 |
93.878 |
100 |
0.939 |
| clpP | Streptococcus pneumoniae D39 |
93.878 |
100 |
0.939 |
| clpP | Streptococcus pneumoniae R6 |
93.878 |
100 |
0.939 |
| clpP | Streptococcus pneumoniae TIGR4 |
93.878 |
100 |
0.939 |
| clpP | Streptococcus pyogenes JRS4 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus pyogenes MGAS315 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus mutans UA159 |
87.755 |
100 |
0.878 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
87.245 |
100 |
0.872 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.735 |
100 |
0.867 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
58.247 |
98.98 |
0.577 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.421 |
96.939 |
0.566 |