Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AOT82_RS10815 Genome accession   NZ_CP012969
Coordinates   2534014..2534391 (+) Length   125 a.a.
NCBI ID   WP_057761576.1    Uniprot ID   A0A7U6KS11
Organism   Psychrobacter sp. AntiMn-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2529014..2539391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOT82_RS10805 (AOT82_2272) - 2531048..2531770 (-) 723 WP_058025471.1 response regulator transcription factor -
  AOT82_RS10810 (AOT82_2273) - 2532078..2533334 (-) 1257 WP_071002985.1 HlyD family efflux transporter periplasmic adaptor subunit -
  AOT82_RS10815 (AOT82_2275) pilG 2534014..2534391 (+) 378 WP_057761576.1 twitching motility response regulator PilG Regulator
  AOT82_RS10820 (AOT82_2276) - 2534575..2534937 (+) 363 WP_071002986.1 response regulator -
  AOT82_RS10825 (AOT82_2277) - 2534941..2535471 (+) 531 WP_071002987.1 chemotaxis protein CheW -
  AOT82_RS10830 (AOT82_2278) - 2535832..2537061 (+) 1230 Protein_2130 methyl-accepting chemotaxis protein -
  AOT82_RS10835 (AOT82_2279) - 2537171..2538106 (+) 936 WP_071002989.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14054.13 Da        Isoelectric Point: 4.5807

>NTDB_id=158671 AOT82_RS10815 WP_057761576.1 2534014..2534391(+) (pilG) [Psychrobacter sp. AntiMn-1]
MENNFEGLKVMVIDDSKTIRRTAETLLQKAGCEVVTAIDGFDALAKIVDNNPDIIFVDIMMPRLDGYQTCALIKNNPDYA
NKPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKDELFDAINQYR

Nucleotide


Download         Length: 378 bp        

>NTDB_id=158671 AOT82_RS10815 WP_057761576.1 2534014..2534391(+) (pilG) [Psychrobacter sp. AntiMn-1]
ATGGAAAATAATTTTGAAGGTTTGAAAGTAATGGTGATTGATGATTCAAAAACCATTCGCCGTACCGCAGAAACCTTGCT
ACAAAAAGCGGGTTGTGAAGTCGTAACCGCTATAGATGGCTTCGATGCCTTAGCAAAAATTGTTGATAACAACCCAGATA
TTATTTTTGTCGACATCATGATGCCGCGCTTAGATGGCTATCAGACTTGTGCACTCATAAAAAATAACCCTGATTATGCT
AATAAACCCGTGATTATGTTGTCATCTAAAGATGGCTTATTTGATAAAGCCCGTGGCCGCATCGTCGGATCTGATGAGTA
TTTGACCAAACCATTTAGTAAAGATGAGCTTTTTGATGCGATTAACCAGTACCGTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U6KS11

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.226

99.2

0.776
  pilH Synechocystis sp. PCC 6803

41.228

91.2

0.376
  vicR Streptococcus mutans UA159

40.517

92.8

0.376

Multiple sequence alignment