Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   SanJ4211_RS09670 Genome accession   NZ_CP012805
Coordinates   1922497..1923687 (+) Length   396 a.a.
NCBI ID   WP_021002247.1    Uniprot ID   A0AAP6EPL7
Organism   Streptococcus anginosus strain J4211     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1917497..1928687
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4211_RS09650 (SanJ4211_1921c) comE 1919307..1920056 (-) 750 WP_021002244.1 competence system response regulator transcription factor ComE Regulator
  SanJ4211_RS09655 (SanJ4211_1922c) comD/comD2 1920056..1921378 (-) 1323 WP_021002245.1 sensor histidine kinase Regulator
  SanJ4211_RS09930 (SanJ4211_1923c) - 1921393..1921542 (-) 150 WP_021002246.1 bacteriocin -
  SanJ4211_RS09665 (SanJ4211_1924c) rlmH 1921824..1922303 (-) 480 WP_041784074.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SanJ4211_RS09670 (SanJ4211_1925) htrA 1922497..1923687 (+) 1191 WP_021002247.1 S1C family serine protease Regulator
  SanJ4211_RS09675 (SanJ4211_1926) spo0J 1923742..1924509 (+) 768 WP_021002248.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 396 a.a.        Molecular weight: 41680.65 Da        Isoelectric Point: 9.5698

>NTDB_id=157732 SanJ4211_RS09670 WP_021002247.1 1922497..1923687(+) (htrA) [Streptococcus anginosus strain J4211]
MKNSSNFTKKLLLLFMVLAIGFIGGLLGNLTSSKLSTNSSTTTKVNQVTTAYKNTNSTTQAVSKVKDAVVSVITYANNNS
QNSVFGNDDSNNNNDNSQQVASEGSGVIYKKDGKYAYLVTNTHVISGAKKVDIRLADGNKVPGEIVGSDTYSDISVVRIS
ADKVKSVAEFGDSSKLTVGETAIAIGSPLGSNYANTVTQGIISSLNRNVSLKSEDGQTISTQAIQTDTAINPGNSGGPLV
NIQGQVIGITSSKIASNGGTSVEGLGFAIPSNDVINIINQLETNGTVTRPALGIQMIDITNLSSSDLSRLKLPSKITSGV
VVRSAQSGMPAEGKLQKYDVITKVDDKEISSTSDLQSALYKHSIGDNIKITFYRNGKETTTTIKLTKSTKDLDSNN

Nucleotide


Download         Length: 1191 bp        

>NTDB_id=157732 SanJ4211_RS09670 WP_021002247.1 1922497..1923687(+) (htrA) [Streptococcus anginosus strain J4211]
ATGAAAAACTCTTCAAATTTCACAAAAAAATTGTTATTGCTTTTCATGGTCTTAGCCATAGGTTTTATCGGTGGTTTACT
TGGAAACTTAACTTCATCTAAATTATCAACAAATAGCTCTACAACGACTAAAGTTAATCAAGTTACTACTGCTTATAAAA
ATACAAATTCCACAACACAAGCTGTGAGTAAAGTAAAAGATGCTGTGGTATCCGTTATTACCTATGCTAATAATAATTCA
CAAAATAGTGTGTTTGGAAATGACGATTCAAATAATAACAATGATAATTCTCAACAAGTAGCTAGCGAAGGATCTGGGGT
TATTTATAAAAAAGATGGAAAATACGCTTACTTAGTAACCAATACTCACGTTATCAGTGGTGCTAAAAAAGTTGACATTC
GTTTAGCAGATGGTAATAAAGTTCCTGGAGAAATTGTAGGGTCAGATACTTATTCTGATATCTCCGTTGTTCGAATTAGT
GCTGATAAAGTAAAATCAGTTGCTGAATTTGGAGATTCTAGTAAATTGACGGTTGGTGAGACAGCTATTGCGATTGGAAG
TCCGCTCGGATCAAATTACGCTAACACTGTGACGCAAGGAATTATTTCTAGTTTAAATCGTAATGTTTCTTTAAAATCTG
AAGATGGACAAACGATTTCAACACAAGCTATTCAAACAGACACAGCTATCAACCCAGGGAACTCTGGAGGACCACTTGTG
AATATCCAAGGACAAGTAATTGGTATTACTTCAAGTAAAATAGCTAGCAACGGCGGAACTTCGGTTGAAGGATTAGGATT
TGCTATTCCATCTAATGATGTTATAAACATTATTAACCAATTAGAAACAAATGGAACTGTTACACGACCAGCTCTAGGAA
TCCAAATGATTGACATCACTAATCTGTCTAGTTCAGATCTATCACGCTTAAAACTTCCATCAAAAATAACTAGTGGAGTT
GTCGTACGTTCAGCTCAATCTGGAATGCCAGCTGAAGGAAAACTTCAAAAATATGATGTGATTACAAAAGTAGATGATAA
AGAAATTTCTTCAACAAGTGATTTACAATCCGCTTTATACAAACATTCAATTGGTGATAATATAAAAATCACTTTCTATC
GTAATGGAAAAGAGACCACTACCACTATAAAACTTACAAAATCTACAAAAGATTTAGATTCAAATAATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

75.312

100

0.763

  htrA Streptococcus mitis NCTC 12261

72.796

100

0.73

  htrA Streptococcus pneumoniae Rx1

72.544

100

0.727

  htrA Streptococcus pneumoniae D39

72.544

100

0.727

  htrA Streptococcus pneumoniae R6

72.544

100

0.727

  htrA Streptococcus pneumoniae TIGR4

72.544

100

0.727

  htrA Streptococcus mutans UA159

55.471

99.242

0.551


Multiple sequence alignment