Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SanJ4211_RS09675 Genome accession   NZ_CP012805
Coordinates   1923742..1924509 (+) Length   255 a.a.
NCBI ID   WP_021002248.1    Uniprot ID   A0AAP6EPV9
Organism   Streptococcus anginosus strain J4211     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1918742..1929509
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4211_RS09650 (SanJ4211_1921c) comE 1919307..1920056 (-) 750 WP_021002244.1 competence system response regulator transcription factor ComE Regulator
  SanJ4211_RS09655 (SanJ4211_1922c) comD/comD2 1920056..1921378 (-) 1323 WP_021002245.1 sensor histidine kinase Regulator
  SanJ4211_RS09930 (SanJ4211_1923c) - 1921393..1921542 (-) 150 WP_021002246.1 bacteriocin -
  SanJ4211_RS09665 (SanJ4211_1924c) rlmH 1921824..1922303 (-) 480 WP_041784074.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SanJ4211_RS09670 (SanJ4211_1925) htrA 1922497..1923687 (+) 1191 WP_021002247.1 S1C family serine protease Regulator
  SanJ4211_RS09675 (SanJ4211_1926) spo0J 1923742..1924509 (+) 768 WP_021002248.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29696.21 Da        Isoelectric Point: 8.0359

>NTDB_id=157733 SanJ4211_RS09675 WP_021002248.1 1923742..1924509(+) (spo0J) [Streptococcus anginosus strain J4211]
MEKYQYIELKDIQTNPYQPRKEFSEEKITELANSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLQNIPAIIKE
LTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIAQTMGKSRPYITNSVRLLNLPLNIIEAIKEGNISQGHA
RLLINLSEKEQNLWFDKILSQELSVRQLEKQLHSKQAKTVTKDKQQLFLKEEEKKLKKIFGTEISLQFSEQSQSGKICIH
FSNLEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=157733 SanJ4211_RS09675 WP_021002248.1 1923742..1924509(+) (spo0J) [Streptococcus anginosus strain J4211]
ATGGAAAAATATCAATATATTGAACTTAAGGACATTCAAACTAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTACTGAACTTGCTAATTCTATAAAAGAACATGGGATTATTCAGCCTATCATCGTACGAAAATCTCCAATAATTGGTT
ATGAATTACTAGCTGGTGAAAGACGTTTTAGAGCTGCTAAATTAGCAGGCTTACAAAATATACCAGCTATTATAAAAGAA
TTAACAGATGATGAAATGATGAAGCAAGCTATCATCGAAAATTTACAACGAGAAGATTTAAATCCTATAGAAGAAGCACA
ATCTTACCAATATTTAATTGACAAAGGATTGACGCATAAAGAAATCGCTCAAACTATGGGAAAATCACGTCCTTATATTA
CAAATTCTGTCCGATTATTAAATTTACCTCTCAATATTATTGAAGCGATAAAAGAAGGAAATATTTCTCAAGGACATGCT
CGTCTGCTCATCAATCTCTCAGAGAAAGAGCAAAATCTGTGGTTTGATAAAATCCTATCTCAAGAACTTTCAGTTCGGCA
GTTAGAAAAACAATTGCATTCCAAACAAGCAAAAACAGTAACAAAAGATAAACAGCAACTCTTCCTCAAAGAGGAAGAGA
AAAAATTAAAAAAGATATTTGGTACAGAGATTTCTCTTCAATTTTCTGAACAATCTCAATCAGGGAAAATTTGTATTCAT
TTTTCAAACCTAGAAGAATATCAAAGGATTATTGACAGCTTTAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(146-191)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.118

100

0.541

Multiple sequence alignment