Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | SanJ4206_RS09220 | Genome accession | NZ_CP012719 |
| Coordinates | 1887636..1888781 (-) | Length | 381 a.a. |
| NCBI ID | WP_003027772.1 | Uniprot ID | A0AAI9NHA9 |
| Organism | Streptococcus anginosus strain J4206 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1856276..1895968 | 1887636..1888781 | within | 0 |
Gene organization within MGE regions
Location: 1856276..1895968
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SanJ4206_RS09065 (SanJ4206_1766c) | - | 1856276..1858150 (-) | 1875 | WP_157622117.1 | phosphotransferase | - |
| SanJ4206_RS09070 (SanJ4206_1767) | - | 1858330..1859562 (+) | 1233 | WP_003027733.1 | nucleotide sugar dehydrogenase | - |
| SanJ4206_RS09075 (SanJ4206_1768c) | - | 1860063..1860470 (-) | 408 | WP_003027735.1 | serine O-acetyltransferase | - |
| SanJ4206_RS09080 (SanJ4206_1769c) | - | 1860500..1861321 (-) | 822 | WP_003027736.1 | LicD family protein | - |
| SanJ4206_RS09085 (SanJ4206_1770c) | - | 1861397..1862353 (-) | 957 | WP_022525202.1 | capsular polysaccharide synthesis protein | - |
| SanJ4206_RS09090 (SanJ4206_1771c) | - | 1862464..1863474 (-) | 1011 | WP_003027738.1 | acyltransferase family protein | - |
| SanJ4206_RS09095 (SanJ4206_1772c) | - | 1863492..1864940 (-) | 1449 | WP_003027739.1 | flippase | - |
| SanJ4206_RS09100 (SanJ4206_1773c) | - | 1864940..1866106 (-) | 1167 | WP_022525206.1 | glycosyltransferase family 4 protein | - |
| SanJ4206_RS09105 (SanJ4206_1774c) | - | 1866123..1867409 (-) | 1287 | WP_003027741.1 | O-antigen polymerase | - |
| SanJ4206_RS09110 (SanJ4206_1775c) | - | 1867433..1868347 (-) | 915 | WP_003027742.1 | glycosyltransferase | - |
| SanJ4206_RS09115 (SanJ4206_1776c) | cps2T | 1868344..1869525 (-) | 1182 | WP_022525207.1 | beta 1-4 rhamnosyltransferase Cps2T | - |
| SanJ4206_RS09120 (SanJ4206_1777c) | - | 1869563..1870936 (-) | 1374 | WP_003027744.1 | sugar transferase | - |
| SanJ4206_RS09125 (SanJ4206_1778c) | - | 1870959..1871654 (-) | 696 | WP_003026604.1 | tyrosine-protein kinase | - |
| SanJ4206_RS09130 (SanJ4206_1779c) | - | 1871667..1872362 (-) | 696 | WP_157622119.1 | CspC family polysaccharide chain length determinant protein | - |
| SanJ4206_RS09135 (SanJ4206_1780c) | cps4B | 1872371..1873102 (-) | 732 | WP_022525209.1 | capsular polysaccharide biosynthesis protein Cps4B | - |
| SanJ4206_RS09140 (SanJ4206_1781c) | - | 1873105..1874556 (-) | 1452 | WP_022525210.1 | LCP family protein | - |
| SanJ4206_RS09145 (SanJ4206_1782c) | nrdG | 1874904..1875509 (-) | 606 | WP_003027750.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| SanJ4206_RS09150 (SanJ4206_1783c) | - | 1875514..1876017 (-) | 504 | WP_003027752.1 | GNAT family N-acetyltransferase | - |
| SanJ4206_RS09155 (SanJ4206_1784c) | - | 1876027..1876524 (-) | 498 | WP_003027754.1 | GNAT family N-acetyltransferase | - |
| SanJ4206_RS09160 (SanJ4206_1785c) | - | 1876584..1876724 (-) | 141 | WP_003027756.1 | hypothetical protein | - |
| SanJ4206_RS09165 (SanJ4206_1786c) | nrdD | 1876733..1878943 (-) | 2211 | WP_022525211.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| SanJ4206_RS09170 (SanJ4206_1787c) | - | 1879051..1880592 (-) | 1542 | WP_003027759.1 | hypothetical protein | - |
| SanJ4206_RS10055 (SanJ4206_1788c) | - | 1880647..1880781 (-) | 135 | WP_003027761.1 | hypothetical protein | - |
| SanJ4206_RS09175 (SanJ4206_1789c) | cls | 1880845..1882377 (-) | 1533 | WP_157622121.1 | cardiolipin synthase | - |
| SanJ4206_RS09180 (SanJ4206_1790c) | - | 1882771..1883208 (-) | 438 | WP_003027763.1 | SP_0198 family lipoprotein | - |
| SanJ4206_RS09185 (SanJ4206_1791c) | - | 1883257..1884498 (-) | 1242 | WP_003027764.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
| SanJ4206_RS09190 (SanJ4206_1792c) | - | 1884699..1885010 (-) | 312 | WP_003027765.1 | DUF1292 domain-containing protein | - |
| SanJ4206_RS09195 (SanJ4206_1793c) | ruvX | 1885028..1885447 (-) | 420 | WP_003027766.1 | Holliday junction resolvase RuvX | - |
| SanJ4206_RS09200 (SanJ4206_1794c) | - | 1885447..1885713 (-) | 267 | WP_009569646.1 | IreB family regulatory phosphoprotein | - |
| SanJ4206_RS09205 (SanJ4206_1795c) | - | 1885836..1886393 (-) | 558 | WP_022525213.1 | SP0191 family lipoprotein | - |
| SanJ4206_RS09210 (SanJ4206_1796c) | - | 1886498..1887067 (-) | 570 | WP_003027769.1 | SP0191 family lipoprotein | - |
| SanJ4206_RS09215 (SanJ4206_1797c) | spx | 1887151..1887549 (-) | 399 | WP_003027770.1 | transcriptional regulator Spx | - |
| SanJ4206_RS09220 (SanJ4206_1798c) | recA | 1887636..1888781 (-) | 1146 | WP_003027772.1 | recombinase RecA | Machinery gene |
| SanJ4206_RS09225 (SanJ4206_1799c) | cinA | 1888829..1890097 (-) | 1269 | WP_022525214.1 | competence/damage-inducible protein A | Machinery gene |
| SanJ4206_RS09235 (SanJ4206_1800) | - | 1890367..1890777 (+) | 411 | WP_003027775.1 | helix-turn-helix domain-containing protein | - |
| SanJ4206_RS09240 | - | 1890828..1891486 (-) | 659 | Protein_1779 | type II CAAX prenyl endopeptidase Rce1 family protein | - |
| SanJ4206_RS09245 (SanJ4206_1801c) | - | 1891491..1892045 (-) | 555 | WP_003027778.1 | DNA-3-methyladenine glycosylase I | - |
| SanJ4206_RS09250 (SanJ4206_1802c) | ruvA | 1892055..1892645 (-) | 591 | WP_003027779.1 | Holliday junction branch migration protein RuvA | - |
| SanJ4206_RS09255 (SanJ4206_1803c) | mutL | 1892779..1894725 (-) | 1947 | WP_037593386.1 | DNA mismatch repair endonuclease MutL | - |
| SanJ4206_RS09260 (SanJ4206_1804c) | - | 1894820..1895968 (-) | 1149 | WP_003027782.1 | tyrosine-type recombinase/integrase | - |
Sequence
Protein
Download Length: 381 a.a. Molecular weight: 41269.88 Da Isoelectric Point: 4.9241
>NTDB_id=156802 SanJ4206_RS09220 WP_003027772.1 1887636..1888781(-) (recA) [Streptococcus anginosus strain J4206]
MAKKQKKLEEISKKFGEERQKALDTALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEIFDEIDHKVRVHYGLIEDDAEDEKNSEATKSANKVEEVTLDLDDAIEIEE
MAKKQKKLEEISKKFGEERQKALDTALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEIFDEIDHKVRVHYGLIEDDAEDEKNSEATKSANKVEEVTLDLDDAIEIEE
Nucleotide
Download Length: 1146 bp
>NTDB_id=156802 SanJ4206_RS09220 WP_003027772.1 1887636..1888781(-) (recA) [Streptococcus anginosus strain J4206]
ATGGCAAAAAAACAAAAAAAATTAGAAGAAATTTCAAAGAAATTTGGCGAGGAACGTCAAAAAGCGCTAGATACTGCACT
TAAAAATATTGAAAAAGATTTTGGTAAAGGAGCGATTATGCGCCTAGGTGAGCGCGCTGAACAAAAAGTTCAAGTCATGA
GTTCAGGTAGCTTGGCGCTAGATATCGCTCTTGGTGCAGGAGGGTATCCAAAGGGGCGGATTATTGAAATCTATGGACCA
GAGTCTTCTGGTAAGACGACCGTAGCTCTTCATGCAGTAGCGCAGGCTCAAAAAGAAGGCGGTATCGCAGCTTTTATTGA
TGCAGAACACGCTCTTGACCCGGCTTATGCACAAGCCCTTGGAGTTAATATTGATGAACTCTTACTTTCTCAGCCAGACT
CTGGTGAGCAAGGTCTTGAGATTGCTGGGAAATTGATTGACTCTGGTGCGGTAGATTTGGTAGTTATTGACTCCGTGGCA
GCCCTCGTACCACGTGCTGAGATTGATGGAGACATTGGAGATAGTCACGTTGGTTTGCAAGCGCGGATGATGAGTCAAGC
TATGCGTAAATTGTCTGCTTCTATTAACAAAACGAAGACAATTGCGATTTTCATCAACCAATTGCGTGAAAAAGTTGGTA
TTATGTTTGGAAATCCAGAAACAACACCTGGTGGTCGTGCCTTGAAATTCTATGCGTCTGTTCGTTTGGATGTTCGCGGA
AATACCCAAATCAAGGGAACTGGTGATGAAAAAGATACCAATGTTGGTAAGGAAACTAAGATTAAGGTTGTGAAGAATAA
GGTTGCTCCGCCATTCAAGGAAGCTTTCGTAGAAATCATGTATGGCGAAGGAATTTCTAAAACAGGCGAGTTGATTAAAA
TTGCGACAGACCTTGATATTATCAAAAAAGCGGGTGCTTGGTATTCTTATAATGATGAAAAGATTGGTCAAGGGTCTGAA
AATGCTAAGAAATACTTGGCGGATCATCCAGAAATTTTTGATGAAATTGATCATAAAGTTCGAGTGCATTACGGTTTGAT
TGAGGATGATGCCGAAGATGAAAAAAATTCAGAAGCAACTAAATCAGCAAACAAGGTGGAGGAAGTAACGCTAGACTTGG
ATGACGCGATTGAGATTGAGGAATAA
ATGGCAAAAAAACAAAAAAAATTAGAAGAAATTTCAAAGAAATTTGGCGAGGAACGTCAAAAAGCGCTAGATACTGCACT
TAAAAATATTGAAAAAGATTTTGGTAAAGGAGCGATTATGCGCCTAGGTGAGCGCGCTGAACAAAAAGTTCAAGTCATGA
GTTCAGGTAGCTTGGCGCTAGATATCGCTCTTGGTGCAGGAGGGTATCCAAAGGGGCGGATTATTGAAATCTATGGACCA
GAGTCTTCTGGTAAGACGACCGTAGCTCTTCATGCAGTAGCGCAGGCTCAAAAAGAAGGCGGTATCGCAGCTTTTATTGA
TGCAGAACACGCTCTTGACCCGGCTTATGCACAAGCCCTTGGAGTTAATATTGATGAACTCTTACTTTCTCAGCCAGACT
CTGGTGAGCAAGGTCTTGAGATTGCTGGGAAATTGATTGACTCTGGTGCGGTAGATTTGGTAGTTATTGACTCCGTGGCA
GCCCTCGTACCACGTGCTGAGATTGATGGAGACATTGGAGATAGTCACGTTGGTTTGCAAGCGCGGATGATGAGTCAAGC
TATGCGTAAATTGTCTGCTTCTATTAACAAAACGAAGACAATTGCGATTTTCATCAACCAATTGCGTGAAAAAGTTGGTA
TTATGTTTGGAAATCCAGAAACAACACCTGGTGGTCGTGCCTTGAAATTCTATGCGTCTGTTCGTTTGGATGTTCGCGGA
AATACCCAAATCAAGGGAACTGGTGATGAAAAAGATACCAATGTTGGTAAGGAAACTAAGATTAAGGTTGTGAAGAATAA
GGTTGCTCCGCCATTCAAGGAAGCTTTCGTAGAAATCATGTATGGCGAAGGAATTTCTAAAACAGGCGAGTTGATTAAAA
TTGCGACAGACCTTGATATTATCAAAAAAGCGGGTGCTTGGTATTCTTATAATGATGAAAAGATTGGTCAAGGGTCTGAA
AATGCTAAGAAATACTTGGCGGATCATCCAGAAATTTTTGATGAAATTGATCATAAAGTTCGAGTGCATTACGGTTTGAT
TGAGGATGATGCCGAAGATGAAAAAAATTCAGAAGCAACTAAATCAGCAAACAAGGTGGAGGAAGTAACGCTAGACTTGG
ATGACGCGATTGAGATTGAGGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.