Detailed information NTG0156095

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: RN86_RS05860
• Genome accession: NZ_CP012648
• Coordinates: 1196810..1197427 (+)
• Length: 205 a.a.
• NCBI ID: WP_256262209.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain KCOM 1506 (= ChDC B679)
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1191810..1202427

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RN86_RS05850 (RN86_05845)	mgtA	1193248..1195908 (+)	2661	WP_046165250.1	magnesium-translocating P-type ATPase	-
RN86_RS05855 (RN86_05850)	upp	1196006..1196635 (+)	630	WP_045635065.1	uracil phosphoribosyltransferase	-
RN86_RS05860 (RN86_05855)	clpP	1196810..1197427 (+)	618	WP_256262209.1	ATP-dependent Clp protease proteolytic subunit	Regulator
RN86_RS05865 (RN86_05860)	-	1197505..1197774 (+)	270	WP_045635066.1	YlbG family protein	-
RN86_RS05870 (RN86_05865)	-	1197864..1199030 (+)	1167	WP_045635067.1	ABC transporter substrate-binding protein	-
RN86_RS05875 (RN86_05870)	-	1199189..1200058 (+)	870	WP_008809556.1	branched-chain amino acid ABC transporter permease	-
RN86_RS05880 (RN86_05875)	-	1200062..1201015 (+)	954	WP_046165252.1	branched-chain amino acid ABC transporter permease	-
RN86_RS05885 (RN86_05880)	-	1201015..1201779 (+)	765	WP_012130688.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 22424.57 Da
• Isoelectric Point: 4.4473

>NTDB_id=156095 RN86_RS05860 WP_256262209.1 1196810..1197427(+) (clpP) [Streptococcus gordonii strain KCOM 1506 (= ChDC B679)]
MQLTESEKTMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSA
GLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRKTLE
QILADNSGKTVEQIHADAERDYWMSAEETLAYGFIDEIMANNNLS

Nucleotide

• Length: 618 bp

>NTDB_id=156095 RN86_RS05860 WP_256262209.1 1196810..1197427(+) (clpP) [Streptococcus gordonii strain KCOM 1506 (= ChDC B679)]
ATCCAACTAACAGAAAGTGAGAAAACTATGATTCCTGTAGTTATTGAACAAACAAGCCGTGGGGAACGCTCGTATGATAT
TTACTCACGCCTATTAAAAGACCGCATCATCATGTTGACAGGTCCGGTAGAGGATAATATGGCTAATTCAGTCATTGCTC
AGCTTCTTTTCTTGGATGCACAAGACAGTACCAAGGATATCTACCTCTATGTTAATACACCAGGTGGTTCAGTCTCAGCT
GGTTTAGCGATTGTTGACACCATGAACTTTATTAAATCCGATGTCCAAACAATCGTTATGGGTATGGCAGCGAGCATGGG
AACCATCATCGCATCAAGCGGTGCCAAAGGCAAACGTTTCATGCTTCCAAATGCTGAATATATGATTCACCAGCCAATGG
GAGGAACTGGTGGTGGTACTCAGCAAACGGATATGGCTATTGCTGCGGAACACTTGTTGAAGACCCGGAAAACTTTAGAG
CAAATTCTTGCCGATAATTCTGGTAAAACAGTTGAGCAAATTCATGCTGATGCAGAACGTGATTATTGGATGAGTGCTGA
AGAAACTCTTGCTTATGGATTCATTGATGAGATCATGGCCAACAATAATTTGAGTTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (20-201)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	92.821	95.122	0.883
clpP	Streptococcus pyogenes JRS4	92.821	95.122	0.883
clpP	Streptococcus pneumoniae D39	92.347	95.61	0.883
clpP	Streptococcus pneumoniae TIGR4	92.347	95.61	0.883
clpP	Streptococcus pneumoniae R6	92.347	95.61	0.883
clpP	Streptococcus pneumoniae Rx1	92.347	95.61	0.883
clpP	Streptococcus mutans UA159	87.745	99.512	0.873
clpP	Streptococcus thermophilus LMD-9	91.282	95.122	0.868
clpP	Streptococcus thermophilus LMG 18311	91.282	95.122	0.868
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	87.179	95.122	0.829
clpP	Lactococcus lactis subsp. cremoris KW2	86.667	95.122	0.824
clpP	Bacillus subtilis subsp. subtilis str. 168	57.292	93.659	0.537
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.895	92.683	0.537