Detailed information NTG0155764

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AMQ28_RS09715
• Genome accession: NZ_CP012608
• Coordinates: 2049356..2050417 (+)
• Length: 353 a.a.
• NCBI ID: WP_053579417.1
• Uniprot ID: -
• Organism: Acinetobacter sp. TTH0-4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2044356..2055417

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AMQ28_RS09700 (AMQ28_09705)	mraY	2044363..2045481 (+)	1119	WP_053579414.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
AMQ28_RS09705 (AMQ28_09710)	-	2045550..2046353 (+)	804	WP_053579415.1	putative RNA methyltransferase	-
AMQ28_RS09710 (AMQ28_09715)	ponA	2046662..2049190 (-)	2529	WP_053579416.1	penicillin-binding protein PBP1a	-
AMQ28_RS09715 (AMQ28_09720)	pilM	2049356..2050417 (+)	1062	WP_053579417.1	pilus assembly protein PilM	Machinery gene
AMQ28_RS09720 (AMQ28_09725)	pilN	2050417..2051046 (+)	630	WP_053579418.1	PilN domain-containing protein	Machinery gene
AMQ28_RS09725 (AMQ28_09730)	comO	2051043..2051786 (+)	744	WP_053579419.1	type 4a pilus biogenesis protein PilO	Machinery gene
AMQ28_RS09730 (AMQ28_09735)	pilP	2051786..2052313 (+)	528	WP_053579420.1	pilus assembly protein PilP	Machinery gene
AMQ28_RS09735 (AMQ28_09740)	pilQ	2052375..2054504 (+)	2130	WP_171250371.1	type IV pilus secretin PilQ family protein	Machinery gene
AMQ28_RS09740 (AMQ28_09745)	aroK	2054541..2055089 (+)	549	WP_053579422.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 39161.77 Da
• Isoelectric Point: 4.5481

>NTDB_id=155764 AMQ28_RS09715 WP_053579417.1 2049356..2050417(+) (pilM) [Acinetobacter sp. TTH0-4]
MLRLYRKPNKGLVGVDISSTSVKLLELSVKSGNRYWVESYALVPLPEGSVVEKNILNPEAVGEALERAINLANIQSKSAA
IAIPTSMVITKTIEMDADMTDDEREVQIRMDAEQYIPFPLDEASLDFEVLPERLANPNRVNVLLVATRLENVEARSEVLE
LANLSPKIADIESFAIENAYQVFSDTLPMGVNTVGILDIGHTMTTLSVMRNNKIIYTREQVFGGKQLTQEIQNRYGLSFE
EAGRAKKSRSLPDDYDVEVLEPYLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTTANPF
LQMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1062 bp

>NTDB_id=155764 AMQ28_RS09715 WP_053579417.1 2049356..2050417(+) (pilM) [Acinetobacter sp. TTH0-4]
GTGCTCAGGTTATATCGTAAGCCAAATAAGGGGTTAGTGGGGGTAGATATTAGTTCTACTTCTGTTAAGTTGCTGGAACT
TTCTGTTAAAAGCGGTAACAGGTATTGGGTAGAAAGCTATGCTTTAGTCCCTTTGCCTGAAGGCAGTGTGGTCGAAAAAA
ATATATTAAATCCAGAGGCGGTTGGAGAAGCATTAGAGCGAGCAATCAATCTTGCCAATATTCAATCAAAATCTGCTGCT
ATAGCCATTCCTACGTCTATGGTGATTACCAAAACGATTGAAATGGACGCAGATATGACAGATGATGAACGCGAAGTTCA
GATTCGTATGGATGCAGAACAATATATTCCTTTTCCTTTAGATGAAGCGAGTCTTGATTTCGAGGTTCTGCCTGAGCGTT
TAGCCAACCCAAACCGTGTAAATGTTCTGTTGGTTGCAACGCGTCTTGAAAATGTAGAAGCGCGTTCTGAAGTGTTGGAA
CTTGCCAATTTAAGTCCAAAAATTGCGGATATAGAAAGCTTTGCAATAGAAAATGCGTATCAAGTATTTTCTGATACTTT
GCCTATGGGTGTGAATACAGTAGGCATCTTAGATATTGGTCATACCATGACCACACTGTCTGTGATGCGAAATAATAAAA
TTATTTATACTCGCGAACAAGTCTTTGGCGGTAAACAGTTAACGCAGGAAATTCAGAATCGTTATGGATTGTCTTTTGAA
GAAGCTGGTCGTGCTAAAAAAAGTCGTTCACTTCCCGATGATTATGATGTTGAAGTACTAGAGCCTTATCTTGAAGCCGT
AGTTCAACAAGCTGCAAGATCATTACAGTTCTTTTTCTCATCTTCACAATTTAACGAAATTGATCATATCTTATTGGCAG
GCGGGAATGCGAATATTCCTGGGCTAGCGAAACTTTTACAACAAAAACTGGGATATCGTGTTACCACTGCTAATCCATTC
TTGCAAATGGGCTTTTCTCCACAAATTGATATTAAAAAAATAGAAAATGATGCTTCATCGCTTATGGTGGCATGTGGTTT
GGCATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	85.552	100	0.856
comM	Acinetobacter nosocomialis M2	84.986	100	0.85
comM	Acinetobacter baylyi ADP1	80.737	100	0.807
pilM	Legionella pneumophila strain ERS1305867	40.282	100	0.405