Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | AMQ28_RS09720 | Genome accession | NZ_CP012608 |
| Coordinates | 2050417..2051046 (+) | Length | 209 a.a. |
| NCBI ID | WP_053579418.1 | Uniprot ID | A0A0M3RLP7 |
| Organism | Acinetobacter sp. TTH0-4 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2045417..2056046
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMQ28_RS09705 (AMQ28_09710) | - | 2045550..2046353 (+) | 804 | WP_053579415.1 | putative RNA methyltransferase | - |
| AMQ28_RS09710 (AMQ28_09715) | ponA | 2046662..2049190 (-) | 2529 | WP_053579416.1 | penicillin-binding protein PBP1a | - |
| AMQ28_RS09715 (AMQ28_09720) | pilM | 2049356..2050417 (+) | 1062 | WP_053579417.1 | pilus assembly protein PilM | Machinery gene |
| AMQ28_RS09720 (AMQ28_09725) | pilN | 2050417..2051046 (+) | 630 | WP_053579418.1 | PilN domain-containing protein | Machinery gene |
| AMQ28_RS09725 (AMQ28_09730) | comO | 2051043..2051786 (+) | 744 | WP_053579419.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AMQ28_RS09730 (AMQ28_09735) | pilP | 2051786..2052313 (+) | 528 | WP_053579420.1 | pilus assembly protein PilP | Machinery gene |
| AMQ28_RS09735 (AMQ28_09740) | pilQ | 2052375..2054504 (+) | 2130 | WP_171250371.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| AMQ28_RS09740 (AMQ28_09745) | aroK | 2054541..2055089 (+) | 549 | WP_053579422.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 23603.96 Da Isoelectric Point: 4.9905
>NTDB_id=155765 AMQ28_RS09720 WP_053579418.1 2050417..2051046(+) (pilN) [Acinetobacter sp. TTH0-4]
MARINLLPWRDELREKRKKEFIAICIGAALIGAFIVALTWFFYNHKLEDQEQANQLISSTNQNLDVQLKSLEGLEAQRNA
IIERMKLIQGLQSQRPIAVRLIDEMARVTPSNLYITKFVRVGDKFTIEGKAESPNTVAEFLRNLEASAWYRNAFMNSFLA
VEEKKDKAPSSVVPRVEESYGSFVVTADLDEIASPSEPEAPQTTVEAAQ
MARINLLPWRDELREKRKKEFIAICIGAALIGAFIVALTWFFYNHKLEDQEQANQLISSTNQNLDVQLKSLEGLEAQRNA
IIERMKLIQGLQSQRPIAVRLIDEMARVTPSNLYITKFVRVGDKFTIEGKAESPNTVAEFLRNLEASAWYRNAFMNSFLA
VEEKKDKAPSSVVPRVEESYGSFVVTADLDEIASPSEPEAPQTTVEAAQ
Nucleotide
Download Length: 630 bp
>NTDB_id=155765 AMQ28_RS09720 WP_053579418.1 2050417..2051046(+) (pilN) [Acinetobacter sp. TTH0-4]
ATGGCAAGAATTAACTTACTCCCTTGGCGCGATGAGCTAAGAGAGAAACGAAAAAAAGAATTTATAGCGATTTGTATTGG
GGCAGCTTTAATTGGGGCATTCATCGTTGCATTAACATGGTTTTTCTACAATCATAAACTTGAAGATCAGGAACAAGCCA
ATCAACTGATTAGCAGTACCAATCAAAATCTTGATGTACAGTTAAAGTCTTTAGAAGGTTTGGAAGCTCAACGTAATGCC
ATTATCGAGCGTATGAAGCTTATTCAGGGATTACAAAGCCAAAGACCCATTGCAGTGCGTTTAATTGATGAGATGGCACG
GGTAACACCAAGTAATTTATATATTACTAAGTTTGTCCGTGTGGGCGACAAATTTACCATTGAAGGTAAAGCTGAAAGTC
CGAATACAGTAGCAGAATTTTTACGTAATCTTGAAGCCTCTGCTTGGTATCGTAATGCATTTATGAATTCGTTTTTAGCA
GTAGAAGAGAAAAAGGATAAAGCACCAAGTTCTGTGGTGCCACGTGTTGAAGAAAGTTATGGTTCATTTGTTGTAACGGC
TGATCTAGATGAAATTGCATCACCTTCAGAACCAGAAGCACCACAAACTACAGTGGAGGCGGCACAATGA
ATGGCAAGAATTAACTTACTCCCTTGGCGCGATGAGCTAAGAGAGAAACGAAAAAAAGAATTTATAGCGATTTGTATTGG
GGCAGCTTTAATTGGGGCATTCATCGTTGCATTAACATGGTTTTTCTACAATCATAAACTTGAAGATCAGGAACAAGCCA
ATCAACTGATTAGCAGTACCAATCAAAATCTTGATGTACAGTTAAAGTCTTTAGAAGGTTTGGAAGCTCAACGTAATGCC
ATTATCGAGCGTATGAAGCTTATTCAGGGATTACAAAGCCAAAGACCCATTGCAGTGCGTTTAATTGATGAGATGGCACG
GGTAACACCAAGTAATTTATATATTACTAAGTTTGTCCGTGTGGGCGACAAATTTACCATTGAAGGTAAAGCTGAAAGTC
CGAATACAGTAGCAGAATTTTTACGTAATCTTGAAGCCTCTGCTTGGTATCGTAATGCATTTATGAATTCGTTTTTAGCA
GTAGAAGAGAAAAAGGATAAAGCACCAAGTTCTGTGGTGCCACGTGTTGAAGAAAGTTATGGTTCATTTGTTGTAACGGC
TGATCTAGATGAAATTGCATCACCTTCAGAACCAGAAGCACCACAAACTACAGTGGAGGCGGCACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
70.192 |
99.522 |
0.699 |
| comN | Acinetobacter baylyi ADP1 |
70.531 |
99.043 |
0.699 |