Detailed information    

insolico Bioinformatically predicted

Overview


Name   clpP   Type   Regulator
Locus tag   ACN91_RS14050 Genome accession   NZ_CP012483
Coordinates   2733386..2733967 (+) Length   193 a.a.
NCBI ID   WP_053564243.1    Uniprot ID   A0A9X7BWN0
Organism   Bacillus cereus strain NJ-W     
Function   degradation of ComK; degradation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 2728386..2738967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN91_RS14025 (ACN91_14060) - 2730140..2730742 (+) 603 WP_053564240.1 hypothetical protein -
  ACN91_RS14030 (ACN91_14065) - 2730995..2731429 (-) 435 WP_001190868.1 GNAT family N-acetyltransferase -
  ACN91_RS14035 (ACN91_14070) rpiA 2731541..2732203 (-) 663 WP_053564241.1 ribose 5-phosphate isomerase A -
  ACN91_RS14040 (ACN91_14075) - 2732208..2732528 (-) 321 WP_001125388.1 2Fe-2S iron-sulfur cluster-binding protein -
  ACN91_RS14045 (ACN91_14080) - 2732672..2733364 (+) 693 WP_053564242.1 RNA polymerase subunit sigma-70 -
  ACN91_RS14050 (ACN91_14085) clpP 2733386..2733967 (+) 582 WP_053564243.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP Regulator
  ACN91_RS14055 (ACN91_14090) - 2734011..2734868 (-) 858 WP_053564244.1 glycine betaine ABC transporter substrate-binding protein -
  ACN91_RS14060 (ACN91_14095) - 2735040..2736245 (+) 1206 WP_000370606.1 glycine betaine/L-proline ABC transporter ATP-binding protein -
  ACN91_RS14065 (ACN91_14100) - 2736238..2737074 (+) 837 WP_016081306.1 proline/glycine betaine ABC transporter permease -
  ACN91_RS28795 (ACN91_14105) - 2737128..2737364 (-) 237 WP_053564245.1 hypothetical protein -
  ACN91_RS14075 (ACN91_14110) - 2737582..2737749 (+) 168 WP_000508401.1 hypothetical protein -
  ACN91_RS14080 (ACN91_14115) - 2737839..2738339 (+) 501 WP_178389855.1 HIT family protein -

Sequence


Protein


Download         Length: 193 a.a.        Molecular weight: 21236.46 Da        Isoelectric Point: 4.9174

>NTDB_id=154709 ACN91_RS14050 WP_053564243.1 2733386..2733967(+) (clpP) [Bacillus cereus strain NJ-W]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKEYGVVDDVVTKK

Nucleotide


Download         Length: 582 bp        

>NTDB_id=154709 ACN91_RS14050 WP_053564243.1 2733386..2733967(+) (clpP) [Bacillus cereus strain NJ-W]
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGTTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTCTTATACATCAATAGCCCCGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTGTGCATGGGCTTTGCGGCATCATTTGGTGCATTGCTATTATTATCTGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGAATATGGGGTTGTAGA
TGATGTTGTTACGAAAAAATAA

Domains


Predicted by InterproScan.

(14-192)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  clpP Bacillus subtilis subsp. subtilis str. 168

69.11

98.964

0.684

  clpP Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

67.725

97.927

0.663

  clpP Streptococcus thermophilus LMD-9

55.729

99.482

0.554

  clpP Streptococcus pneumoniae Rx1

55.729

99.482

0.554

  clpP Streptococcus pneumoniae D39

55.729

99.482

0.554

  clpP Streptococcus pneumoniae TIGR4

55.729

99.482

0.554

  clpP Streptococcus pneumoniae R6

55.729

99.482

0.554

  clpP Streptococcus thermophilus LMG 18311

55.729

99.482

0.554

  clpP Streptococcus pyogenes JRS4

55.556

97.927

0.544

  clpP Streptococcus pyogenes MGAS315

55.556

97.927

0.544

  clpP Streptococcus mutans UA159

53.968

97.927

0.528

  clpP Lactococcus lactis subsp. cremoris KW2

52.91

97.927

0.518

  clpP Lactococcus lactis subsp. lactis strain DGCC12653

50.794

97.927

0.497


Multiple sequence alignment