Detailed information    

insolico Bioinformatically predicted

Overview


Name   clpP   Type   Regulator
Locus tag   ACN91_RS02150 Genome accession   NZ_CP012483
Coordinates   441534..442115 (-) Length   193 a.a.
NCBI ID   WP_001049162.1    Uniprot ID   A0A9W5QPC2
Organism   Bacillus cereus strain NJ-W     
Function   degradation of ComK; degradation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 436534..447115
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN91_RS02125 (ACN91_02125) - 437504..437962 (+) 459 WP_001190080.1 8-oxo-dGTP diphosphatase -
  ACN91_RS02130 (ACN91_02130) rapZ 437983..438864 (+) 882 WP_000138459.1 RNase adapter RapZ -
  ACN91_RS02135 (ACN91_02135) - 438868..439821 (+) 954 WP_053563374.1 YvcK family protein -
  ACN91_RS02140 (ACN91_02140) whiA 439910..440860 (+) 951 WP_000006566.1 DNA-binding protein WhiA -
  ACN91_RS02145 (ACN91_02145) - 440884..441132 (+) 249 WP_000250307.1 HPr family phosphocarrier protein -
  ACN91_RS02150 (ACN91_02150) clpP 441534..442115 (-) 582 WP_001049162.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP Regulator
  ACN91_RS02155 (ACN91_02155) - 442356..443225 (-) 870 WP_053563375.1 DUF421 domain-containing protein -
  ACN91_RS02160 (ACN91_02160) - 443246..443452 (-) 207 WP_053563376.1 DUF1657 domain-containing protein -
  ACN91_RS02165 (ACN91_02165) spoVAE 443464..443814 (-) 351 WP_000575919.1 stage V sporulation protein AE -
  ACN91_RS02170 (ACN91_02170) spoVAD 443811..444827 (-) 1017 WP_053563377.1 stage V sporulation protein AD -
  ACN91_RS02175 (ACN91_02175) spoVAC 444828..445304 (-) 477 WP_000095399.1 stage V sporulation protein AC -
  ACN91_RS02180 (ACN91_02180) - 445334..445819 (-) 486 WP_001228545.1 YhcN/YlaJ family sporulation lipoprotein -
  ACN91_RS02185 (ACN91_02185) - 445913..446119 (-) 207 WP_000216166.1 DUF1657 domain-containing protein -

Sequence


Protein


Download         Length: 193 a.a.        Molecular weight: 21419.67 Da        Isoelectric Point: 5.0423

>NTDB_id=154692 ACN91_RS02150 WP_001049162.1 441534..442115(-) (clpP) [Bacillus cereus strain NJ-W]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR

Nucleotide


Download         Length: 582 bp        

>NTDB_id=154692 ACN91_RS02150 WP_001049162.1 441534..442115(-) (clpP) [Bacillus cereus strain NJ-W]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTACTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATCTATGATACA
ATGCAGTTTATTAAGCCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACTGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCGGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA

Domains


Predicted by InterproScan.

(13-192)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  clpP Bacillus subtilis subsp. subtilis str. 168

90.104

99.482

0.896

  clpP Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

67.021

97.409

0.653

  clpP Streptococcus thermophilus LMG 18311

60.417

99.482

0.601

  clpP Streptococcus thermophilus LMD-9

60.417

99.482

0.601

  clpP Lactococcus lactis subsp. cremoris KW2

58.854

99.482

0.585

  clpP Streptococcus pneumoniae D39

57.292

99.482

0.57

  clpP Streptococcus pneumoniae Rx1

57.292

99.482

0.57

  clpP Streptococcus pneumoniae R6

57.292

99.482

0.57

  clpP Streptococcus pneumoniae TIGR4

57.292

99.482

0.57

  clpP Lactococcus lactis subsp. lactis strain DGCC12653

56.771

99.482

0.565

  clpP Streptococcus pyogenes JRS4

55.729

99.482

0.554

  clpP Streptococcus pyogenes MGAS315

55.729

99.482

0.554

  clpP Streptococcus mutans UA159

55.44

100

0.554


Multiple sequence alignment