Detailed information NTG0154632

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: AMR71_RS03100
• Genome accession: NZ_CP012482
• Coordinates: 628981..629562 (+)
• Length: 193 a.a.
• NCBI ID: WP_234781022.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain NJ-V2
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 623981..634562

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AMR71_RS03075 (AMR71_03075)	degS	624039..625214 (+)	1176	WP_003213166.1	sensor histidine kinase	Regulator
AMR71_RS03080 (AMR71_03080)	degU	625279..625968 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
AMR71_RS03085 (AMR71_03085)	-	626180..627022 (+)	843	WP_024719242.1	DegV family protein	-
AMR71_RS03090 (AMR71_03090)	comFA	627142..628521 (+)	1380	WP_141116131.1	DEAD/DEAH box helicase	Machinery gene
AMR71_RS03095 (AMR71_03095)	-	628586..628879 (+)	294	WP_035701582.1	late competence development ComFB family protein	-
AMR71_RS03100 (AMR71_03100)	comFC	628981..629562 (+)	582	WP_234781022.1	ComF family protein	Machinery gene
AMR71_RS03105 (AMR71_03105)	-	629619..630038 (+)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
AMR71_RS03110 (AMR71_03110)	flgM	630118..630381 (+)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
AMR71_RS03115 (AMR71_03115)	-	630400..630882 (+)	483	WP_007499977.1	flagellar protein FlgN	-
AMR71_RS03120 (AMR71_03120)	flgK	630898..632418 (+)	1521	WP_017368142.1	flagellar hook-associated protein FlgK	-
AMR71_RS03125 (AMR71_03125)	flgL	632427..633338 (+)	912	WP_017368141.1	flagellar hook-associated protein FlgL	-
AMR71_RS03130 (AMR71_03130)	-	633385..633963 (+)	579	WP_017368140.1	DUF6470 family protein	-
AMR71_RS03135 (AMR71_03135)	fliW	633992..634426 (+)	435	WP_057078992.1	flagellar assembly protein FliW	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 22137.94 Da
• Isoelectric Point: 10.5295

>NTDB_id=154632 AMR71_RS03100 WP_234781022.1 628981..629562(+) (comFC) [Bacillus altitudinis strain NJ-V2]
MKIQCPTCPKCGRAQLNDQLCQDCSRWNKRRDFAEILVMNRSVYAYNDFMKDILARFKFRGDTALADLFKKDVQSAFKRS
FSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVHQSKQSKKRKNERLHQQNLFQLRQSNPIVLKDVVLI
DDIYTTGATVYHAAKILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 582 bp

>NTDB_id=154632 AMR71_RS03100 WP_234781022.1 628981..629562(+) (comFC) [Bacillus altitudinis strain NJ-V2]
ATGAAGATTCAATGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATTAAATGATCAATTGTGTCAGGATTGTTCAAGGTG
GAATAAACGACGGGATTTTGCTGAGATTCTTGTGATGAATCGATCTGTTTATGCTTACAACGACTTTATGAAAGATATTC
TAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGATGTACAGTCAGCGTTTAAACGTTCT
TTTTCAATCAAAGAACCGGTCCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAAAGGAAAGAGGATTCAATCAGTCAAT
GATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACATCAAAGTAAGCAGTCTAAGAAAAGAA
AAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGATCGTTCTAAAGGATGTCGTATTAATC
GATGACATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAGAAGCAGGCGCCAAAAGTGTTTCCTC
TTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (126-191)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50.777	100	0.508
comFC/cflB	Streptococcus mitis SK321	40.541	95.855	0.389
comFC/cflB	Streptococcus mitis NCTC 12261	40	95.855	0.383
comFC/cflB	Streptococcus pneumoniae TIGR4	39.459	95.855	0.378
comFC/cflB	Streptococcus pneumoniae Rx1	39.459	95.855	0.378
comFC/cflB	Streptococcus pneumoniae D39	39.459	95.855	0.378
comFC/cflB	Streptococcus pneumoniae R6	39.459	95.855	0.378