Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   AMD29_RS10975 Genome accession   NZ_CP012419
Coordinates   619567..619755 (+) Length   62 a.a.
NCBI ID   WP_000027835.1    Uniprot ID   A0AAV3JNT7
Organism   Streptococcus agalactiae strain SG-M1     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 614567..624755
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AMD29_RS03435 (AMD29_03430) - 615006..616382 (+) 1377 WP_017647836.1 ABC transporter permease -
  AMD29_RS03440 (AMD29_03435) - 616479..617132 (+) 654 WP_000699093.1 response regulator transcription factor -
  AMD29_RS03445 (AMD29_03440) - 617129..618448 (+) 1320 WP_000734169.1 sensor histidine kinase -
  AMD29_RS03450 (AMD29_03445) - 618500..619147 (-) 648 Protein_606 IS3 family transposase -
  AMD29_RS03455 (AMD29_03450) - 619325..619525 (+) 201 WP_000076708.1 CsbD family protein -
  AMD29_RS10975 prx 619567..619755 (+) 189 WP_000027835.1 hypothetical protein Regulator
  AMD29_RS03460 (AMD29_03455) - 620180..621385 (+) 1206 WP_000078931.1 FtsW/RodA/SpoVE family cell cycle protein -
  AMD29_RS03465 (AMD29_03460) - 621504..622064 (+) 561 WP_001106189.1 HAD-IA family hydrolase -
  AMD29_RS03470 (AMD29_03465) gyrB 622065..624017 (+) 1953 WP_000134196.1 DNA topoisomerase (ATP-hydrolyzing) subunit B -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7180.25 Da        Isoelectric Point: 4.7815

>NTDB_id=154419 AMD29_RS10975 WP_000027835.1 619567..619755(+) (prx) [Streptococcus agalactiae strain SG-M1]
MSIRTDIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLLHEEVREEEVVTVERVLDVLRKLS

Nucleotide


Download         Length: 189 bp        

>NTDB_id=154419 AMD29_RS10975 WP_000027835.1 619567..619755(+) (prx) [Streptococcus agalactiae strain SG-M1]
TTGTCTATCAGAACAGATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGT
GCGTAAAAACGGAAAGATATTTGATTATGTGTTACTACACGAAGAAGTGAGAGAAGAAGAGGTTGTTACAGTTGAGAGAG
TGCTTGATGTACTGAGGAAGTTATCATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

72.222

87.097

0.629
  prx Streptococcus pyogenes MGAS8232

69.091

88.71

0.613
  prx Streptococcus pyogenes MGAS315

66.667

87.097

0.581
  prx Streptococcus pyogenes MGAS315

85

64.516

0.548
  prx Streptococcus pyogenes MGAS315

61.818

88.71

0.548
  prx Streptococcus pyogenes MGAS315

74.359

62.903

0.468
  prx Streptococcus pyogenes MGAS315

78.378

59.677

0.468

Multiple sequence alignment