Detailed information NTG0153426

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: AKO65_RS06785
• Genome accession: NZ_CP012329
• Coordinates: 1385768..1386349 (+)
• Length: 193 a.a.
• NCBI ID: WP_234781022.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain NJ-M2
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1380768..1391349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AKO65_RS06760 (AKO65_06760)	degS	1380826..1382001 (+)	1176	WP_003213166.1	sensor histidine kinase	Regulator
AKO65_RS06765 (AKO65_06765)	degU	1382066..1382755 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
AKO65_RS06770 (AKO65_06770)	-	1382967..1383809 (+)	843	WP_024719242.1	DegV family protein	-
AKO65_RS06775 (AKO65_06775)	comFA	1383929..1385308 (+)	1380	WP_141116131.1	DEAD/DEAH box helicase	Machinery gene
AKO65_RS06780 (AKO65_06780)	-	1385373..1385666 (+)	294	WP_035701582.1	late competence development ComFB family protein	-
AKO65_RS06785 (AKO65_06785)	comFC	1385768..1386349 (+)	582	WP_234781022.1	ComF family protein	Machinery gene
AKO65_RS06790 (AKO65_06790)	-	1386406..1386825 (+)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
AKO65_RS06795 (AKO65_06795)	flgM	1386905..1387168 (+)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
AKO65_RS06800 (AKO65_06800)	-	1387187..1387669 (+)	483	WP_007499977.1	flagellar protein FlgN	-
AKO65_RS06805 (AKO65_06805)	flgK	1387685..1389205 (+)	1521	WP_017368142.1	flagellar hook-associated protein FlgK	-
AKO65_RS06810 (AKO65_06810)	flgL	1389214..1390125 (+)	912	WP_017368141.1	flagellar hook-associated protein FlgL	-
AKO65_RS06815 (AKO65_06815)	-	1390172..1390750 (+)	579	WP_017368140.1	DUF6470 family protein	-
AKO65_RS06820 (AKO65_06820)	fliW	1390779..1391213 (+)	435	WP_057078992.1	flagellar assembly protein FliW	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 22137.94 Da
• Isoelectric Point: 10.5295

>NTDB_id=153426 AKO65_RS06785 WP_234781022.1 1385768..1386349(+) (comFC) [Bacillus altitudinis strain NJ-M2]
MKIQCPTCPKCGRAQLNDQLCQDCSRWNKRRDFAEILVMNRSVYAYNDFMKDILARFKFRGDTALADLFKKDVQSAFKRS
FSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVHQSKQSKKRKNERLHQQNLFQLRQSNPIVLKDVVLI
DDIYTTGATVYHAAKILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 582 bp

>NTDB_id=153426 AKO65_RS06785 WP_234781022.1 1385768..1386349(+) (comFC) [Bacillus altitudinis strain NJ-M2]
ATGAAGATTCAATGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATTAAATGATCAATTGTGTCAGGATTGTTCAAGGTG
GAATAAACGACGGGATTTTGCTGAGATTCTTGTGATGAATCGATCTGTTTATGCTTACAACGACTTTATGAAAGATATTC
TAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGATGTACAGTCAGCGTTTAAACGTTCT
TTTTCAATCAAAGAACCGGTCCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAAAGGAAAGAGGATTCAATCAGTCAAT
GATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACATCAAAGTAAGCAGTCTAAGAAAAGAA
AAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGATCGTTCTAAAGGATGTCGTATTAATC
GATGACATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAGAAGCAGGCGCCAAAAGTGTTTCCTC
TTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (126-191)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50.777	100	0.508
comFC/cflB	Streptococcus mitis SK321	40.541	95.855	0.389
comFC/cflB	Streptococcus mitis NCTC 12261	40	95.855	0.383
comFC/cflB	Streptococcus pneumoniae TIGR4	39.459	95.855	0.378
comFC/cflB	Streptococcus pneumoniae Rx1	39.459	95.855	0.378
comFC/cflB	Streptococcus pneumoniae D39	39.459	95.855	0.378
comFC/cflB	Streptococcus pneumoniae R6	39.459	95.855	0.378