Detailed information NTG0153423

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AKO65_RS06760
• Genome accession: NZ_CP012329
• Coordinates: 1380826..1382001 (+)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain NJ-M2
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1375826..1387001

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AKO65_RS06740 (AKO65_06740)	tuaH	1376367..1377614 (+)	1248	WP_057078991.1	teichuronic acid biosynthesis protein TuaH	-
AKO65_RS06745 (AKO65_06745)	-	1377749..1378816 (+)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
AKO65_RS06750 (AKO65_06750)	-	1378854..1379951 (-)	1098	WP_007499958.1	LCP family protein	-
AKO65_RS06755 (AKO65_06755)	-	1379936..1380604 (-)	669	WP_017357860.1	YigZ family protein	-
AKO65_RS06760 (AKO65_06760)	degS	1380826..1382001 (+)	1176	WP_003213166.1	sensor histidine kinase	Regulator
AKO65_RS06765 (AKO65_06765)	degU	1382066..1382755 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
AKO65_RS06770 (AKO65_06770)	-	1382967..1383809 (+)	843	WP_024719242.1	DegV family protein	-
AKO65_RS06775 (AKO65_06775)	comFA	1383929..1385308 (+)	1380	WP_141116131.1	DEAD/DEAH box helicase	Machinery gene
AKO65_RS06780 (AKO65_06780)	-	1385373..1385666 (+)	294	WP_035701582.1	late competence development ComFB family protein	-
AKO65_RS06785 (AKO65_06785)	comFC	1385768..1386349 (+)	582	WP_234781022.1	ComF family protein	Machinery gene
AKO65_RS06790 (AKO65_06790)	-	1386406..1386825 (+)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=153423 AKO65_RS06760 WP_003213166.1 1380826..1382001(+) (degS) [Bacillus altitudinis strain NJ-M2]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=153423 AKO65_RS06760 WP_003213166.1 1380826..1382001(+) (degS) [Bacillus altitudinis strain NJ-M2]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGATGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATAGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCTTAGGTGATACTGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCAGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841