Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | lpt_RS09325 | Genome accession | NZ_CP012019 |
| Coordinates | 2103166..2103579 (-) | Length | 137 a.a. |
| NCBI ID | WP_011946811.1 | Uniprot ID | A0AAN5R315 |
| Organism | Legionella pneumophila subsp. pneumophila strain Toronto-20052 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2098166..2108579
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| lpt_RS09315 (lpt_09300) | letS | 2099095..2101827 (+) | 2733 | WP_011946809.1 | two-component system sensor histidine kinase LetS | Regulator |
| lpt_RS09320 (lpt_09305) | - | 2101925..2103169 (+) | 1245 | WP_011946810.1 | 6-phosphofructokinase | - |
| lpt_RS09325 (lpt_09310) | pilA2 | 2103166..2103579 (-) | 414 | WP_011946811.1 | pilin | Machinery gene |
| lpt_RS09330 (lpt_09315) | pilA2 | 2103781..2104194 (-) | 414 | WP_042754743.1 | pilin | Machinery gene |
| lpt_RS09335 (lpt_09320) | - | 2104497..2104814 (+) | 318 | WP_042754744.1 | BolA family transcriptional regulator | - |
| lpt_RS09340 (lpt_09325) | - | 2104889..2106310 (+) | 1422 | WP_042754745.1 | APC family permease | - |
| lpt_RS09345 (lpt_09330) | - | 2106441..2107871 (-) | 1431 | WP_042754746.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14681.10 Da Isoelectric Point: 7.7736
>NTDB_id=150396 lpt_RS09325 WP_011946811.1 2103166..2103579(-) (pilA2) [Legionella pneumophila subsp. pneumophila strain Toronto-20052]
MRTKGFTLIELMIVAAILGILLAIAFPAYQDYTIRARVAEGLEKASFAKLAVAEKILIDNILPLNQADTSYSSPIPTDSV
ASIAIGNQGIITITYTANAGNGTITMVPTIDATNRILTWDCTGGTLISKYRPAYCRP
MRTKGFTLIELMIVAAILGILLAIAFPAYQDYTIRARVAEGLEKASFAKLAVAEKILIDNILPLNQADTSYSSPIPTDSV
ASIAIGNQGIITITYTANAGNGTITMVPTIDATNRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=150396 lpt_RS09325 WP_011946811.1 2103166..2103579(-) (pilA2) [Legionella pneumophila subsp. pneumophila strain Toronto-20052]
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCTGCTATCCTTGGGATTCTACTTGCCATCGCTTTTCC
AGCCTATCAGGACTATACCATCAGAGCGCGGGTGGCTGAAGGATTGGAAAAGGCTTCATTTGCAAAATTAGCCGTTGCCG
AGAAGATTTTGATAGATAATATATTGCCATTAAATCAAGCAGATACTAGTTACTCAAGTCCCATACCCACAGACAGTGTC
GCCTCTATAGCTATTGGCAATCAAGGCATAATTACCATTACCTACACGGCAAATGCAGGTAATGGCACTATTACAATGGT
TCCTACAATAGATGCCACTAACAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCTGCTATCCTTGGGATTCTACTTGCCATCGCTTTTCC
AGCCTATCAGGACTATACCATCAGAGCGCGGGTGGCTGAAGGATTGGAAAAGGCTTCATTTGCAAAATTAGCCGTTGCCG
AGAAGATTTTGATAGATAATATATTGCCATTAAATCAAGCAGATACTAGTTACTCAAGTCCCATACCCACAGACAGTGTC
GCCTCTATAGCTATTGGCAATCAAGGCATAATTACCATTACCTACACGGCAAATGCAGGTAATGGCACTATTACAATGGT
TCCTACAATAGATGCCACTAACAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
68.613 |
100 |
0.686 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
67.883 |
100 |
0.679 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
44.444 |
100 |
0.526 |
| comP | Acinetobacter baylyi ADP1 |
45.517 |
100 |
0.482 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.065 |
100 |
0.431 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
38.406 |
100 |
0.387 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
36.957 |
100 |
0.372 |