Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   AYM92_RS06185 Genome accession   NZ_CP014542
Coordinates   1182811..1182993 (-) Length   60 a.a.
NCBI ID   WP_032463717.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain STAB14018     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1177811..1187993
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AYM92_RS06170 (AYM92_05985) - 1178249..1178944 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  AYM92_RS06175 (AYM92_05990) - 1179183..1180118 (+) 936 WP_023610138.1 dihydroorotate oxidase -
  AYM92_RS06180 (AYM92_05995) - 1180418..1182280 (-) 1863 WP_076639304.1 heavy metal translocating P-type ATPase -
  AYM92_RS06185 (AYM92_06000) prx 1182811..1182993 (-) 183 WP_032463717.1 hypothetical protein Regulator
  AYM92_RS06190 (AYM92_06005) spel 1183108..1183896 (-) 789 WP_021340779.1 streptococcal pyrogenic exotoxin SpeL -
  AYM92_RS06195 (AYM92_06010) spem 1184178..1184831 (-) 654 Protein_1153 streptococcal pyrogenic exotoxin SpeM -
  AYM92_RS06200 (AYM92_06015) - 1184865..1185461 (+) 597 WP_087486717.1 hypothetical protein -
  AYM92_RS06205 (AYM92_06020) - 1185472..1185768 (+) 297 WP_023078532.1 hypothetical protein -
  AYM92_RS06210 (AYM92_06025) - 1185765..1185950 (+) 186 WP_011054731.1 holin -
  AYM92_RS06215 (AYM92_06030) - 1186061..1186615 (+) 555 Protein_1157 glycoside hydrolase family 73 protein -
  AYM92_RS06220 (AYM92_06035) - 1186851..1187543 (+) 693 WP_002994484.1 AP2 domain-containing protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6949.84 Da        Isoelectric Point: 4.0606

>NTDB_id=148632 AYM92_RS06185 WP_032463717.1 1182811..1182993(-) (prx) [Streptococcus pyogenes strain STAB14018]
MLTYDEFKQAIDDGYIVGDTVMIVRKNGQIFDYVLPHEEARNGEVVTEEKVEEVMVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=148632 AYM92_RS06185 WP_032463717.1 1182811..1182993(-) (prx) [Streptococcus pyogenes strain STAB14018]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGATGACGGATATATCGTAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAAGCGAGAAATGGAGAAGTTGTGACAGAGGAGAAGGTGGAAGAAG
TGATGGTGGAGCTTTCGAGATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

96.667

0.967

  prx Streptococcus pyogenes MGAS8232

85

100

0.85

  prx Streptococcus pyogenes MGAS315

83.333

100

0.833

  prx Streptococcus pyogenes MGAS315

81.667

100

0.817

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

87.805

68.333

0.6

  prx Streptococcus pyogenes MGAS315

76.19

70

0.533


Multiple sequence alignment