Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   SpyM6D471_RS07255 Genome accession   NZ_CP011415
Coordinates   1451965..1452147 (-) Length   60 a.a.
NCBI ID   WP_047149504.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain D471     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1446965..1457147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SpyM6D471_RS07240 (SpyM6D471_07235) - 1447225..1447686 (-) 462 WP_002988493.1 deaminase -
  SpyM6D471_RS07245 (SpyM6D471_07240) - 1447721..1448794 (-) 1074 WP_021340125.1 Xaa-Pro peptidase family protein -
  SpyM6D471_RS07250 (SpyM6D471_07245) uvrA 1448910..1451738 (-) 2829 WP_023077881.1 excinuclease ABC subunit UvrA -
  SpyM6D471_RS07255 (SpyM6D471_07250) prx 1451965..1452147 (-) 183 WP_047149504.1 hypothetical protein Regulator
  SpyM6D471_RS07260 (SpyM6D471_07255) - 1452844..1454049 (-) 1206 WP_047149505.1 glucosaminidase domain-containing protein -
  SpyM6D471_RS07270 (SpyM6D471_07265) - 1454172..1454399 (-) 228 WP_029714020.1 phage holin -
  SpyM6D471_RS07275 (SpyM6D471_07270) - 1454396..1454668 (-) 273 WP_011017397.1 hypothetical protein -
  SpyM6D471_RS07280 (SpyM6D471_07275) - 1454680..1455318 (-) 639 WP_046735270.1 hypothetical protein -
  SpyM6D471_RS07285 (SpyM6D471_07280) - 1455321..1455749 (-) 429 WP_002988448.1 DUF1617 family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6865.91 Da        Isoelectric Point: 3.9764

>NTDB_id=145822 SpyM6D471_RS07255 WP_047149504.1 1451965..1452147(-) (prx) [Streptococcus pyogenes strain D471]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPGEPVRPWEVMTVEVAGEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=145822 SpyM6D471_RS07255 WP_047149504.1 1451965..1452147(-) (prx) [Streptococcus pyogenes strain D471]
ATGCTAACATACGACGAGTTTAAGCAAGCAATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
TGGACAGATTTTTGATTATGTTTTGCCCGGTGAGCCTGTGAGACCGTGGGAGGTTATGACAGTTGAAGTAGCGGGAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS8232

71.667

100

0.717
  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583
  prx Streptococcus pyogenes MGAS315

75.61

68.333

0.517

Multiple sequence alignment