Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | XI92_RS16355 | Genome accession | NZ_CP011349 |
| Coordinates | 3152381..3152962 (-) | Length | 193 a.a. |
| NCBI ID | WP_001049162.1 | Uniprot ID | A0A9W5QPC2 |
| Organism | Bacillus thuringiensis strain YC-10 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3147381..3157962
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XI92_RS16325 (XI92_16325) | - | 3147390..3148196 (+) | 807 | WP_000455200.1 | DUF368 domain-containing protein | - |
| XI92_RS16330 (XI92_16330) | - | 3148426..3148884 (+) | 459 | WP_001190080.1 | 8-oxo-dGTP diphosphatase | - |
| XI92_RS16335 (XI92_16335) | rapZ | 3148905..3149786 (+) | 882 | WP_000138459.1 | RNase adapter RapZ | - |
| XI92_RS16340 (XI92_16340) | - | 3149790..3150743 (+) | 954 | WP_000712186.1 | YvcK family protein | - |
| XI92_RS16345 (XI92_16345) | whiA | 3150832..3151781 (+) | 950 | Protein_3149 | DNA-binding protein WhiA | - |
| XI92_RS16350 (XI92_16350) | - | 3151805..3152053 (+) | 249 | WP_000250307.1 | HPr family phosphocarrier protein | - |
| XI92_RS16355 (XI92_16355) | clpP | 3152381..3152962 (-) | 582 | WP_001049162.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| XI92_RS16360 (XI92_16360) | - | 3153203..3154072 (-) | 870 | WP_000018924.1 | DUF421 domain-containing protein | - |
| XI92_RS16365 (XI92_16365) | - | 3154093..3154299 (-) | 207 | WP_000215909.1 | DUF1657 domain-containing protein | - |
| XI92_RS16370 (XI92_16370) | spoVAE | 3154311..3154661 (-) | 351 | WP_000575919.1 | stage V sporulation protein AE | - |
| XI92_RS16375 (XI92_16375) | spoVAD | 3154658..3155674 (-) | 1017 | WP_000938972.1 | stage V sporulation protein AD | - |
| XI92_RS16380 (XI92_16380) | spoVAC | 3155675..3156151 (-) | 477 | WP_000095408.1 | stage V sporulation protein AC | - |
| XI92_RS16385 (XI92_16385) | - | 3156181..3156669 (-) | 489 | WP_001226064.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| XI92_RS16390 (XI92_16390) | - | 3156763..3156969 (-) | 207 | WP_000216166.1 | DUF1657 domain-containing protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21419.67 Da Isoelectric Point: 5.0423
>NTDB_id=145000 XI92_RS16355 WP_001049162.1 3152381..3152962(-) (clpP) [Bacillus thuringiensis strain YC-10]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=145000 XI92_RS16355 WP_001049162.1 3152381..3152962(-) (clpP) [Bacillus thuringiensis strain YC-10]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATCTATGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCAGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGCGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACTGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAAATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATCTATGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCAGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGCGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACTGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAAATCTTTACAAATCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |