Detailed information
Bioinformatically predicted
Overview
| Name | prx | Type | Regulator |
| Locus tag | SAHN016_RS10445 | Genome accession | NZ_CP011325 |
| Coordinates | 605608..605796 (+) | Length | 62 a.a. |
| NCBI ID | WP_000027835.1 | Uniprot ID | A0AAV3JNT7 |
| Organism | Streptococcus agalactiae strain HN016 | ||
| Function | Inhibit ComR activation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 596418..605566 | 605608..605796 | flank | 42 |
| IS/Tn | 604562..605173 | 605608..605796 | flank | 435 |
Gene organization within MGE regions
Location: 596418..605796
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAHN016_RS03215 (SAHN016_03215) | - | 596418..596684 (-) | 267 | WP_001872365.1 | hypothetical protein | - |
| SAHN016_RS11110 | - | 596690..598067 (+) | 1378 | Protein_557 | IS3 family transposase | - |
| SAHN016_RS10440 | - | 598240..598401 (-) | 162 | WP_000508795.1 | TM2 domain-containing protein | - |
| SAHN016_RS03235 (SAHN016_03235) | - | 599143..600420 (+) | 1278 | WP_000594368.1 | ABC transporter permease | - |
| SAHN016_RS03240 (SAHN016_03240) | - | 600430..601086 (+) | 657 | WP_000353149.1 | ABC transporter ATP-binding protein | - |
| SAHN016_RS03245 (SAHN016_03245) | - | 601086..602462 (+) | 1377 | WP_000594351.1 | ABC transporter permease | - |
| SAHN016_RS03250 (SAHN016_03250) | - | 602559..603212 (+) | 654 | WP_000699093.1 | response regulator transcription factor | - |
| SAHN016_RS03255 (SAHN016_03255) | - | 603209..604510 (+) | 1302 | WP_000734168.1 | sensor histidine kinase | - |
| SAHN016_RS03260 (SAHN016_03260) | - | 604562..605209 (-) | 648 | Protein_564 | IS3 family transposase | - |
| SAHN016_RS03265 (SAHN016_03265) | - | 605387..605566 (+) | 180 | WP_000076709.1 | CsbD family protein | - |
| SAHN016_RS10445 | prx | 605608..605796 (+) | 189 | WP_000027835.1 | hypothetical protein | Regulator |
Sequence
Protein
Download Length: 62 a.a. Molecular weight: 7180.25 Da Isoelectric Point: 4.7815
>NTDB_id=144606 SAHN016_RS10445 WP_000027835.1 605608..605796(+) (prx) [Streptococcus agalactiae strain HN016]
MSIRTDIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLLHEEVREEEVVTVERVLDVLRKLS
MSIRTDIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLLHEEVREEEVVTVERVLDVLRKLS
Nucleotide
Download Length: 189 bp
>NTDB_id=144606 SAHN016_RS10445 WP_000027835.1 605608..605796(+) (prx) [Streptococcus agalactiae strain HN016]
TTGTCTATCAGAACAGATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGT
GCGTAAAAACGGAAAGATATTTGATTATGTGTTACTACACGAAGAAGTGAGAGAAGAAGAGGTTGTTACAGTTGAGAGAG
TGCTTGATGTACTGAGGAAGTTATCATAA
TTGTCTATCAGAACAGATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGT
GCGTAAAAACGGAAAGATATTTGATTATGTGTTACTACACGAAGAAGTGAGAGAAGAAGAGGTTGTTACAGTTGAGAGAG
TGCTTGATGTACTGAGGAAGTTATCATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| prx | Streptococcus pyogenes MGAS315 |
72.222 |
87.097 |
0.629 |
| prx | Streptococcus pyogenes MGAS8232 |
69.091 |
88.71 |
0.613 |
| prx | Streptococcus pyogenes MGAS315 |
66.667 |
87.097 |
0.581 |
| prx | Streptococcus pyogenes MGAS315 |
85 |
64.516 |
0.548 |
| prx | Streptococcus pyogenes MGAS315 |
61.818 |
88.71 |
0.548 |
| prx | Streptococcus pyogenes MGAS315 |
74.359 |
62.903 |
0.468 |
| prx | Streptococcus pyogenes MGAS315 |
78.378 |
59.677 |
0.468 |