Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | LG3211_RS18360 | Genome accession | NZ_CP011131 |
| Coordinates | 4536395..4536826 (+) | Length | 143 a.a. |
| NCBI ID | WP_057944089.1 | Uniprot ID | - |
| Organism | Lysobacter gummosus strain 3.2.11 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4531395..4541826
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LG3211_RS18350 (LG3211_4044) | - | 4532554..4534179 (+) | 1626 | WP_235113844.1 | ATP-binding protein | - |
| LG3211_RS18355 (LG3211_4045) | pilR | 4534277..4535686 (+) | 1410 | WP_057944088.1 | sigma-54 dependent transcriptional regulator | Regulator |
| LG3211_RS18360 (LG3211_4046) | pilA2 | 4536395..4536826 (+) | 432 | WP_057944089.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| LG3211_RS18365 (LG3211_4047) | - | 4537193..4537606 (+) | 414 | WP_057944090.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| LG3211_RS18370 (LG3211_4048) | - | 4537731..4539626 (+) | 1896 | WP_148649004.1 | hypothetical protein | - |
| LG3211_RS18375 (LG3211_4049) | - | 4539718..4541610 (+) | 1893 | WP_148649005.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 14613.96 Da Isoelectric Point: 8.1045
>NTDB_id=142637 LG3211_RS18360 WP_057944089.1 4536395..4536826(+) (pilA2) [Lysobacter gummosus strain 3.2.11]
MKKQQGFTLIELMIVIAILGILIAIALPAYQDYTIRTKNVECLNVAAAAKLAVSETAQDRGSLGAITATNTGYSFIASSY
CSTVAITAGTGVIIATTLGGVGGTGGASVAFTLKPTQAAGRIEWDCSVPAGTKMSQVPAECRP
MKKQQGFTLIELMIVIAILGILIAIALPAYQDYTIRTKNVECLNVAAAAKLAVSETAQDRGSLGAITATNTGYSFIASSY
CSTVAITAGTGVIIATTLGGVGGTGGASVAFTLKPTQAAGRIEWDCSVPAGTKMSQVPAECRP
Nucleotide
Download Length: 432 bp
>NTDB_id=142637 LG3211_RS18360 WP_057944089.1 4536395..4536826(+) (pilA2) [Lysobacter gummosus strain 3.2.11]
ATGAAGAAGCAGCAAGGCTTTACCCTCATCGAACTGATGATCGTCATCGCGATCCTGGGCATCCTGATCGCCATCGCTCT
GCCGGCGTACCAGGACTACACGATCCGCACCAAGAACGTTGAGTGCCTCAACGTCGCCGCCGCCGCCAAGCTGGCCGTGT
CGGAAACCGCTCAGGACCGTGGCTCGCTCGGCGCGATCACCGCGACCAACACCGGCTACAGCTTCATCGCCAGCAGCTAC
TGCTCCACCGTCGCCATCACTGCCGGTACCGGCGTGATCATCGCGACCACCCTCGGCGGCGTTGGCGGCACCGGCGGCGC
TTCTGTCGCGTTCACCCTGAAGCCGACCCAGGCCGCTGGCCGCATCGAATGGGATTGCTCGGTCCCGGCCGGCACCAAGA
TGTCGCAGGTTCCGGCTGAATGCCGTCCGTAA
ATGAAGAAGCAGCAAGGCTTTACCCTCATCGAACTGATGATCGTCATCGCGATCCTGGGCATCCTGATCGCCATCGCTCT
GCCGGCGTACCAGGACTACACGATCCGCACCAAGAACGTTGAGTGCCTCAACGTCGCCGCCGCCGCCAAGCTGGCCGTGT
CGGAAACCGCTCAGGACCGTGGCTCGCTCGGCGCGATCACCGCGACCAACACCGGCTACAGCTTCATCGCCAGCAGCTAC
TGCTCCACCGTCGCCATCACTGCCGGTACCGGCGTGATCATCGCGACCACCCTCGGCGGCGTTGGCGGCACCGGCGGCGC
TTCTGTCGCGTTCACCCTGAAGCCGACCCAGGCCGCTGGCCGCATCGAATGGGATTGCTCGGTCCCGGCCGGCACCAAGA
TGTCGCAGGTTCCGGCTGAATGCCGTCCGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
48.611 |
100 |
0.49 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
48.611 |
100 |
0.49 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
40.476 |
100 |
0.476 |
| comP | Acinetobacter baylyi ADP1 |
42.667 |
100 |
0.448 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
42.857 |
97.902 |
0.42 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.667 |
100 |
0.385 |