Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | VT08_RS01765 | Genome accession | NZ_CP011069 |
| Coordinates | 336424..337014 (+) | Length | 196 a.a. |
| NCBI ID | WP_011284532.1 | Uniprot ID | Q48V25 |
| Organism | Streptococcus pyogenes strain STAB09014 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 331424..342014
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VT08_RS01750 (VT08_01745) | - | 332236..333681 (-) | 1446 | WP_011284530.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase | - |
| VT08_RS01755 (VT08_01750) | - | 333769..335403 (+) | 1635 | WP_011284531.1 | polysaccharide biosynthesis protein | - |
| VT08_RS01760 (VT08_01755) | upp | 335571..336200 (+) | 630 | WP_002985854.1 | uracil phosphoribosyltransferase | - |
| VT08_RS01765 (VT08_01760) | clpP | 336424..337014 (+) | 591 | WP_011284532.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| VT08_RS01770 (VT08_01765) | - | 337509..337784 (+) | 276 | WP_011284533.1 | YlbG family protein | - |
| VT08_RS01775 (VT08_01770) | tmk | 338033..338668 (+) | 636 | WP_002990917.1 | dTMP kinase | - |
| VT08_RS01780 (VT08_01775) | - | 338686..339561 (+) | 876 | WP_002985844.1 | DNA polymerase III subunit delta' | - |
| VT08_RS01785 (VT08_01785) | yabA | 340064..340387 (+) | 324 | WP_002985838.1 | DNA replication initiation control protein YabA | - |
| VT08_RS01790 (VT08_01790) | rsmI | 340392..341255 (+) | 864 | WP_002985836.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| VT08_RS01795 (VT08_01795) | - | 341282..341674 (+) | 393 | WP_002985833.1 | DUF5684 domain-containing protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21678.91 Da Isoelectric Point: 5.2834
>NTDB_id=141976 VT08_RS01765 WP_011284532.1 336424..337014(+) (clpP) [Streptococcus pyogenes strain STAB09014]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLTYGFIDEIMENNELK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLTYGFIDEIMENNELK
Nucleotide
Download Length: 591 bp
>NTDB_id=141976 VT08_RS01765 WP_011284532.1 336424..337014(+) (clpP) [Streptococcus pyogenes strain STAB09014]
ATGATTCCTGTTGTTATTGAACAAACTAGCCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTAAAAGACCGTAT
TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA
ACACGAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC
TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA
AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA
CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCACAAAATGCTGGGAAA
ACGATTAAACAAATTCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGACTTACGGTTTCATTGA
TGAAATCATGGAAAACAACGAACTAAAATAA
ATGATTCCTGTTGTTATTGAACAAACTAGCCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTAAAAGACCGTAT
TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA
ACACGAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC
TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA
AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA
CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCACAAAATGCTGGGAAA
ACGATTAAACAAATTCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGACTTACGGTTTCATTGA
TGAAATCATGGAAAACAACGAACTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus pyogenes MGAS315 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus pyogenes JRS4 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus mutans UA159 |
90.816 |
100 |
0.908 |
| clpP | Streptococcus pneumoniae Rx1 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus pneumoniae D39 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus pneumoniae R6 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus pneumoniae TIGR4 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus thermophilus LMG 18311 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus thermophilus LMD-9 |
89.796 |
100 |
0.898 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
86.224 |
100 |
0.862 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
85.714 |
100 |
0.857 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
57.143 |
100 |
0.571 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
56.995 |
98.469 |
0.561 |