Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   VU19_RS06330 Genome accession   NZ_CP011068
Coordinates   1280813..1280995 (-) Length   60 a.a.
NCBI ID   WP_011054726.1    Uniprot ID   A0A5S4TS04
Organism   Streptococcus pyogenes strain STAB10015     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1275813..1285995
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VU19_RS06310 (VU19_06305) - 1276216..1276932 (-) 717 WP_011284965.1 B3/4 domain-containing protein -
  VU19_RS06315 (VU19_06310) - 1276946..1278025 (-) 1080 WP_021341002.1 MmcQ/YjbR family DNA-binding protein -
  VU19_RS06320 (VU19_06315) - 1278098..1279831 (-) 1734 WP_011284967.1 sensor histidine kinase -
  VU19_RS06325 (VU19_06320) - 1279828..1280568 (-) 741 WP_011054725.1 response regulator -
  VU19_RS06330 (VU19_06325) prx 1280813..1280995 (-) 183 WP_011054726.1 hypothetical protein Regulator
  VU19_RS06340 (VU19_06335) - 1281341..1281916 (-) 576 WP_011054727.1 hypothetical protein -
  VU19_RS06345 (VU19_06340) spek 1282392..1283171 (-) 780 WP_011054728.1 streptococcal pyrogenic exotoxin SpeK -
  VU19_RS06350 (VU19_06345) - 1283475..1284341 (-) 867 WP_011054729.1 DUF334 domain-containing protein -
  VU19_RS06355 (VU19_06350) - 1284329..1284853 (-) 525 WP_011017840.1 Panacea domain-containing protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6771.70 Da        Isoelectric Point: 3.9944

>NTDB_id=141938 VU19_RS06330 WP_011054726.1 1280813..1280995(-) (prx) [Streptococcus pyogenes strain STAB10015]
MLTYDEFKQAIDNGYIVGDTVAIVRKNGQIFDYVLPGEKVRPSEVVAEEIVEEVVVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=141938 VU19_RS06330 WP_011054726.1 1280813..1280995(-) (prx) [Streptococcus pyogenes strain STAB10015]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCGTAGGAGACACAGTAGCGATTGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCTGGCGAAAAAGTCAGACCGTCGGAGGTTGTGGCTGAGGAAATAGTGGAAGAGG
TGGTGGTGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1

  prx Streptococcus pyogenes MGAS8232

80

100

0.8

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

87.805

68.333

0.6


Multiple sequence alignment