Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   SD90_RS04745 Genome accession   NZ_CP010450
Coordinates   958748..958969 (-) Length   73 a.a.
NCBI ID   WP_011184577.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NGAS638     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 953748..963969
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SD90_RS04725 (SD90_04735) - 955580..955951 (+) 372 WP_002989617.1 GntR family transcriptional regulator -
  SD90_RS04730 (SD90_04740) - 955951..956649 (+) 699 WP_002984437.1 ABC transporter ATP-binding protein -
  SD90_RS04735 (SD90_04745) - 956659..957444 (+) 786 WP_032462884.1 hypothetical protein -
  SD90_RS04740 (SD90_04750) - 957575..958189 (-) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  SD90_RS04745 (SD90_04755) prx 958748..958969 (-) 222 WP_011184577.1 hypothetical protein Regulator
  SD90_RS04755 (SD90_04765) - 959315..959890 (-) 576 WP_011054727.1 hypothetical protein -
  SD90_RS04760 (SD90_04770) spek 960366..961145 (-) 780 WP_011054728.1 streptococcal pyrogenic exotoxin SpeK -
  SD90_RS04765 (SD90_04775) - 962012..962653 (-) 642 Protein_906 CHAP domain-containing protein -
  SD90_RS04770 (SD90_04780) - 962766..963458 (-) 693 WP_002994484.1 AP2 domain-containing protein -

Sequence

Protein


Download         Length: 73 a.a.        Molecular weight: 8688.99 Da        Isoelectric Point: 4.3322

>NTDB_id=137395 SD90_RS04745 WP_011184577.1 958748..958969(-) (prx) [Streptococcus pyogenes strain NGAS638]
MLTYDEFKQAIDDGYIVGDTVMIVRKNGQIFDYVLPNEKIRDWEVVTEEKVEEVMVELDYIIMKKTLSRQKNN

Nucleotide


Download         Length: 222 bp        

>NTDB_id=137395 SD90_RS04745 WP_011184577.1 958748..958969(-) (prx) [Streptococcus pyogenes strain NGAS638]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGATGACGGATATATCGTAGGAGACACAGTTATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAGAGATTGGGAGGTTGTGACAGAGGAGAAGGTGGAAGAAG
TGATGGTGGAATTAGACTATATCATAATGAAGAAAACTTTGAGTAGACAGAAAAATAATTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

91.803

83.562

0.767
  prx Streptococcus pyogenes MGAS315

84.483

79.452

0.671
  prx Streptococcus pyogenes MGAS315

81.356

80.822

0.658
  prx Streptococcus pyogenes MGAS8232

81.034

79.452

0.644
  prx Streptococcus pyogenes MGAS315

76.271

80.822

0.616
  prx Streptococcus pyogenes MGAS315

90.244

56.164

0.507
  prx Streptococcus pyogenes MGAS315

78.571

57.534

0.452

Multiple sequence alignment