Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | SB24_RS12815 | Genome accession | NZ_CP010406 |
| Coordinates | 2702268..2702864 (-) | Length | 198 a.a. |
| NCBI ID | WP_003151513.1 | Uniprot ID | I2CAH7 |
| Organism | Bacillus sp. Pc3 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2697268..2707864
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SB24_RS12790 (SB24_12790) | - | 2697385..2697705 (-) | 321 | WP_003151506.1 | MazG-like family protein | - |
| SB24_RS12795 (SB24_12795) | - | 2697821..2698396 (+) | 576 | WP_015387658.1 | TIGR00730 family Rossman fold protein | - |
| SB24_RS12800 (SB24_12800) | - | 2698641..2700017 (-) | 1377 | WP_015240656.1 | MFS transporter | - |
| SB24_RS12805 (SB24_12805) | - | 2700061..2701191 (-) | 1131 | WP_033575188.1 | PrpF domain-containing protein | - |
| SB24_RS12810 (SB24_12810) | - | 2701365..2702225 (+) | 861 | WP_033575187.1 | LysR family transcriptional regulator | - |
| SB24_RS12815 (SB24_12815) | clpP | 2702268..2702864 (-) | 597 | WP_003151513.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| SB24_RS12820 (SB24_12820) | - | 2703112..2704086 (-) | 975 | WP_039253726.1 | LacI family DNA-binding transcriptional regulator | - |
| SB24_RS12825 (SB24_12825) | - | 2704478..2705710 (+) | 1233 | WP_033575186.1 | MFS transporter | - |
| SB24_RS12830 (SB24_12830) | - | 2705725..2707194 (+) | 1470 | WP_015418283.1 | glycoside hydrolase family 32 protein | - |
| SB24_RS12840 (SB24_12840) | - | 2707546..2707857 (-) | 312 | WP_039253731.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21831.06 Da Isoelectric Point: 4.6982
>NTDB_id=136899 SB24_RS12815 WP_003151513.1 2702268..2702864(-) (clpP) [Bacillus sp. Pc3]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSADEALEYGLIDKVLTRNTEDQK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSADEALEYGLIDKVLTRNTEDQK
Nucleotide
Download Length: 597 bp
>NTDB_id=136899 SB24_RS12815 WP_003151513.1 2702268..2702864(-) (clpP) [Bacillus sp. Pc3]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGAGAAAGAGCTTATGACATTTACTCCCGTCTTTTGAAGGA
CCGTATTATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTTGAAGCGG
AAGACCCTGAAAAAGATATTTCCATTTACATTAACAGCCCTGGCGGATCAATCACTGCCGGCATGGCAATCTATGATACA
ATGCAGTTCATTAAACCGAAAGTATCCACGATCTGCATCGGTATGGCCGCTTCTATGGGAGCATTTTTACTTGCAGCCGG
AGAAAAAGGCAAACGTTACGCGCTTCCTAACAGTGAAGTTATGATTCACCAGCCGCTTGGCGGAGCGCAAGGACAGGCGA
CAGAAATTGAAATCGCGGCAAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGTACCGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACAGACCGCGACAACTTCAAATCAGCTGATGAAGCCTTAGAATACGGCTTAATCGA
TAAAGTGCTGACACGCAATACAGAAGACCAGAAGTAA
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGAGAAAGAGCTTATGACATTTACTCCCGTCTTTTGAAGGA
CCGTATTATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTTGAAGCGG
AAGACCCTGAAAAAGATATTTCCATTTACATTAACAGCCCTGGCGGATCAATCACTGCCGGCATGGCAATCTATGATACA
ATGCAGTTCATTAAACCGAAAGTATCCACGATCTGCATCGGTATGGCCGCTTCTATGGGAGCATTTTTACTTGCAGCCGG
AGAAAAAGGCAAACGTTACGCGCTTCCTAACAGTGAAGTTATGATTCACCAGCCGCTTGGCGGAGCGCAAGGACAGGCGA
CAGAAATTGAAATCGCGGCAAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGTACCGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACAGACCGCGACAACTTCAAATCAGCTGATGAAGCCTTAGAATACGGCTTAATCGA
TAAAGTGCTGACACGCAATACAGAAGACCAGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
95.96 |
100 |
0.96 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.586 |
96.465 |
0.662 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.549 |
97.475 |
0.571 |
| clpP | Streptococcus thermophilus LMD-9 |
58.549 |
97.475 |
0.571 |
| clpP | Streptococcus pneumoniae D39 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae Rx1 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae R6 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.216 |
97.98 |
0.561 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pyogenes JRS4 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus pyogenes MGAS315 |
55.44 |
97.475 |
0.54 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
54.639 |
97.98 |
0.535 |
| clpP | Streptococcus mutans UA159 |
54.639 |
97.98 |
0.535 |