Detailed information NTG0136603

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: RR32_RS01600
• Genome accession: NZ_CP010368
• Coordinates: 346296..347354 (+)
• Length: 352 a.a.
• NCBI ID: WP_004711654.1
• Uniprot ID: A0AAV3IQ41
• Organism: Acinetobacter nosocomialis strain 6411
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 341296..352354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RR32_RS01585 (RR32_01590)	-	342399..342731 (+)	333	WP_002051722.1	DUF7709 family protein	-
RR32_RS01590 (RR32_01595)	-	342734..343558 (+)	825	WP_004884737.1	putative RNA methyltransferase	-
RR32_RS01595 (RR32_01600)	ponA	343576..346134 (-)	2559	WP_039246126.1	penicillin-binding protein PBP1a	-
RR32_RS01600 (RR32_01605)	comM	346296..347354 (+)	1059	WP_004711654.1	pilus assembly protein PilM	Machinery gene
RR32_RS01605 (RR32_01610)	pilN	347354..347998 (+)	645	WP_004711656.1	PilN domain-containing protein	Machinery gene
RR32_RS01610 (RR32_01615)	pilO	347995..348735 (+)	741	WP_006581061.1	type 4a pilus biogenesis protein PilO	Machinery gene
RR32_RS01615 (RR32_01620)	pilP	348746..349273 (+)	528	WP_004711660.1	pilus assembly protein PilP	Machinery gene
RR32_RS01620 (RR32_01625)	pilQ	349336..351501 (+)	2166	WP_039246129.1	type IV pilus secretin PilQ	Machinery gene
RR32_RS01625 (RR32_01630)	aroK	351513..352082 (+)	570	WP_002051689.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39065.66 Da
• Isoelectric Point: 4.4177

>NTDB_id=136603 RR32_RS01600 WP_004711654.1 346296..347354(+) (comM) [Acinetobacter nosocomialis strain 6411]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTNAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLLNPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRTLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=136603 RR32_RS01600 WP_004711654.1 346296..347354(+) (comM) [Acinetobacter nosocomialis strain 6411]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGCGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCTGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCGGTAGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTAATGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGTGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTACATACCGTTCCCGCTGGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCTGATCGCTTGC
TGAATCCAAATCGAGTAAATGTTCTTTTGGTCGCAACAAGAACGGAAAACGTTGAAACACGTGTTGAAGTTCTTGAATTG
GCAGATTTGAATCCTAAACTGGCAGATGTCGAGAGTTATGCAGTCGAACGTGCTTTTAGTGTGTTTGCTGATAGCTTGCC
GATGGGCGCAAATACGATAGGAATTTTAGATATCGGCCATACCATGACAACACTATCGGTCATGCAAAATGGCAAGATTA
TTTATACTCGTGAGCAGGTTTTTGGTGGTAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCCTATCTCTAGAAGAA
GCAAGCCGAGCTAAAAAAGACCGTACTTTGCCAGATGATTATGAAATTGAGGTACTAGATCCATTTCTAGATGCTGTGGT
TCAGCAGGCGGCCCGCTCATTACAATTTTTCTTTTCTTCATCTCAGTTTAACGAAATAGACCATATTTTGCTTGCAGGTG
GCAATGCGAATATTCCAGGTCTTGCCAAGCTTTTGCAGCAAAAATTAGGCTACCGTGTCACTATTGCCAACCCATTTTTA
CAAATGGGTTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGCGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	100	100	1
pilM	Acinetobacter baumannii D1279779	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.373	100	0.426