Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | NF53_RS13925 | Genome accession | NZ_CP010106 |
| Coordinates | 2707054..2707635 (-) | Length | 193 a.a. |
| NCBI ID | WP_000991611.1 | Uniprot ID | A0A9W5V399 |
| Organism | Bacillus thuringiensis serovar indiana strain HD521 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2702054..2712635
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NF53_RS13895 (NF53_2660) | - | 2702677..2703177 (-) | 501 | WP_002005170.1 | HIT family protein | - |
| NF53_RS13900 (NF53_2661) | - | 2703269..2703436 (-) | 168 | WP_002196584.1 | hypothetical protein | - |
| NF53_RS33110 (NF53_2662) | - | 2703654..2703890 (+) | 237 | WP_000283222.1 | hypothetical protein | - |
| NF53_RS13910 (NF53_2663) | - | 2703944..2704780 (-) | 837 | WP_001084760.1 | proline/glycine betaine ABC transporter permease | - |
| NF53_RS13915 (NF53_2664) | - | 2704773..2705978 (-) | 1206 | WP_000370606.1 | glycine betaine/L-proline ABC transporter ATP-binding protein | - |
| NF53_RS13920 (NF53_2665) | - | 2706150..2707007 (+) | 858 | WP_001227619.1 | glycine betaine ABC transporter substrate-binding protein | - |
| NF53_RS13925 (NF53_2666) | clpP | 2707054..2707635 (-) | 582 | WP_000991611.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| NF53_RS13930 (NF53_2667) | - | 2707657..2708343 (-) | 687 | WP_050821890.1 | RNA polymerase subunit sigma-70 | - |
| NF53_RS13935 (NF53_2668) | - | 2708486..2708806 (+) | 321 | WP_001125388.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| NF53_RS13940 (NF53_2669) | rpiA | 2708811..2709473 (+) | 663 | WP_001049985.1 | ribose 5-phosphate isomerase A | - |
| NF53_RS13945 (NF53_2670) | - | 2709588..2710022 (+) | 435 | WP_001190864.1 | GNAT family N-acetyltransferase | - |
| NF53_RS13950 (NF53_2671) | - | 2710149..2711516 (-) | 1368 | WP_001065135.1 | lytic polysaccharide monooxygenase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21191.46 Da Isoelectric Point: 5.3277
>NTDB_id=134231 NF53_RS13925 WP_000991611.1 2707054..2707635(-) (clpP) [Bacillus thuringiensis serovar indiana strain HD521]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDNVVTKK
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDNVVTKK
Nucleotide
Download Length: 582 bp
>NTDB_id=134231 NF53_RS13925 WP_000991611.1 2707054..2707635(-) (clpP) [Bacillus thuringiensis serovar indiana strain HD521]
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTGAAAGA
CCGCATTATTATTATCGGCTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATTCTTATACATCAATAGCCCTGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTGTTATTATTATCAGG
GGCAAAAGGAAAACGGTTTGCTCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACGGGGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TAACGTTGTTACGAAAAAATAA
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTGAAAGA
CCGCATTATTATTATCGGCTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATTCTTATACATCAATAGCCCTGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTGTTATTATTATCAGG
GGCAAAAGGAAAACGGTTTGCTCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACGGGGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TAACGTTGTTACGAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
68.586 |
98.964 |
0.679 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.196 |
97.927 |
0.658 |
| clpP | Streptococcus pyogenes JRS4 |
56.085 |
97.927 |
0.549 |
| clpP | Streptococcus pyogenes MGAS315 |
56.085 |
97.927 |
0.549 |
| clpP | Streptococcus pneumoniae R6 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus pneumoniae TIGR4 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus pneumoniae Rx1 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus thermophilus LMG 18311 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus thermophilus LMD-9 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus pneumoniae D39 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus mutans UA159 |
53.968 |
97.927 |
0.528 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
52.381 |
97.927 |
0.513 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.265 |
97.927 |
0.492 |