Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   HKU488_RS08035 Genome accession   NZ_CP012045
Coordinates   1596979..1597161 (-) Length   60 a.a.
NCBI ID   WP_002988483.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain HKU488     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1591979..1602161
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HKU488_RS08020 (HKU488_01491) - 1592240..1592701 (-) 462 WP_002988493.1 deoxycytidylate deaminase -
  HKU488_RS08025 (HKU488_01492) - 1592736..1593809 (-) 1074 WP_010922627.1 M24 family metallopeptidase -
  HKU488_RS08030 (HKU488_01493) uvrA 1593924..1596752 (-) 2829 WP_015055996.1 excinuclease ABC subunit UvrA Machinery gene
  HKU488_RS08035 (HKU488_01494) prx 1596979..1597161 (-) 183 WP_002988483.1 hypothetical protein Regulator
  HKU488_RS08040 (HKU488_01495) mf2 1597401..1598159 (+) 759 WP_002985324.1 DNase Mf2 -
  HKU488_RS08045 (HKU488_01496) speC 1598270..1598977 (+) 708 WP_002988478.1 streptococcal pyrogenic exotoxin SpeC -
  HKU488_RS08050 (HKU488_01497) - 1599045..1599179 (-) 135 WP_002988476.1 hypothetical protein -
  HKU488_RS08055 (HKU488_01498) entC3 1599292..1600074 (-) 783 WP_002988472.1 enterotoxin type C3 EntC3 -
  HKU488_RS08060 (HKU488_01499) - 1600322..1601446 (-) 1125 WP_002988467.1 Fic family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6952.00 Da        Isoelectric Point: 3.9017

>NTDB_id=131044 HKU488_RS08035 WP_002988483.1 1596979..1597161(-) (prx) [Streptococcus pyogenes strain HKU488]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPDEPVRPWEVMTVEVVGEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=131044 HKU488_RS08035 WP_002988483.1 1596979..1597161(-) (prx) [Streptococcus pyogenes strain HKU488]
ATGCTAACATACGACGAATTTAAACAAGCAATTGACAATGGATATATCACAGCAGACACAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCCGATGAGCCTGTGAGACCGTGGGAGGTTATGACAGTTGAAGTAGTGGGAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

76.667

100

0.767
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS8232

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583
  prx Streptococcus pyogenes MGAS315

75.61

68.333

0.517