Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   SpyM6JRS4_RS05330 Genome accession   NZ_CP011414
Coordinates   1086468..1086650 (-) Length   60 a.a.
NCBI ID   WP_011184726.1    Uniprot ID   -
Organism   Streptococcus pyogenes JRS4     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1081468..1091650
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SpyM6JRS4_RS05315 (SpyM6JRS4_05310) - 1081906..1082601 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  SpyM6JRS4_RS05320 (SpyM6JRS4_05315) - 1082840..1083775 (+) 936 WP_010922443.1 dihydroorotate oxidase -
  SpyM6JRS4_RS09630 - 1083830..1084003 (-) 174 WP_002989134.1 hypothetical protein -
  SpyM6JRS4_RS05325 (SpyM6JRS4_05320) - 1084075..1085937 (-) 1863 WP_011184725.1 heavy metal translocating P-type ATPase -
  SpyM6JRS4_RS05330 (SpyM6JRS4_05325) prx 1086468..1086650 (-) 183 WP_011184726.1 hypothetical protein Regulator
  SpyM6JRS4_RS05335 (SpyM6JRS4_05330) mf2 1086890..1087648 (+) 759 WP_011184727.1 DNase Mf2 -
  SpyM6JRS4_RS05340 (SpyM6JRS4_05335) speC 1087759..1088466 (+) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  SpyM6JRS4_RS05345 (SpyM6JRS4_05340) - 1088535..1089287 (-) 753 WP_030126404.1 CHAP domain-containing protein -
  SpyM6JRS4_RS05355 (SpyM6JRS4_05350) - 1089405..1089860 (-) 456 WP_011184730.1 phage holin family protein -
  SpyM6JRS4_RS05360 (SpyM6JRS4_05355) - 1089870..1090481 (-) 612 WP_011184731.1 DUF1366 domain-containing protein -
  SpyM6JRS4_RS05365 (SpyM6JRS4_05360) - 1090484..1090912 (-) 429 WP_011184732.1 DUF1617 family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6936.91 Da        Isoelectric Point: 4.1954

>NTDB_id=127935 SpyM6JRS4_RS05330 WP_011184726.1 1086468..1086650(-) (prx) [Streptococcus pyogenes JRS4]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPNEKIKNGEIVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=127935 SpyM6JRS4_RS05330 WP_011184726.1 1086468..1086650(-) (prx) [Streptococcus pyogenes JRS4]
ATGCTAACATACGACGAATTTAAACAAGCAATTGACAATGGATATATCACAGCAGACACAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAAGAATGGAGAAATTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

98.333

100

0.983
  prx Streptococcus pyogenes MGAS8232

86.667

100

0.867
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6
  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583
  prx Streptococcus pyogenes MGAS315

71.429

70

0.5