Detailed information NTG0126836

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ID12_RS01800
• Genome accession: NZ_CP009108
• Coordinates: 352188..352784 (+)
• Length: 198 a.a.
• NCBI ID: WP_007500118.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain GR-8
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 347188..357784

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ID12_RS01780 (ID12_01845)	-	348301..349125 (-)	825	WP_050826637.1	hypothetical protein	-
ID12_RS01785 (ID12_01850)	-	349201..350433 (-)	1233	WP_050826638.1	Fic family protein	-
ID12_RS19685	-	350870..350953 (-)	84	WP_123768178.1	helix-turn-helix transcriptional regulator	-
ID12_RS01790 (ID12_01855)	-	351003..351641 (-)	639	WP_123768166.1	hypothetical protein	-
ID12_RS01800 (ID12_01865)	clpP	352188..352784 (+)	597	WP_007500118.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
ID12_RS01805 (ID12_01870)	-	352840..353418 (-)	579	WP_008347796.1	TIGR00730 family Rossman fold protein	-
ID12_RS01810 (ID12_01875)	-	353555..353896 (+)	342	WP_008347798.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
ID12_RS01815 (ID12_01880)	-	353925..355547 (-)	1623	WP_008348111.1	SulP family inorganic anion transporter	-
ID12_RS01820 (ID12_01885)	-	355585..356166 (-)	582	WP_008348113.1	beta-class carbonic anhydrase	-
ID12_RS01825 (ID12_01895)	-	356730..357707 (+)	978	WP_008348120.1	2-hydroxyacid dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21846.03 Da
• Isoelectric Point: 4.6905

>NTDB_id=126836 ID12_RS01800 WP_007500118.1 352188..352784(+) (clpP) [Bacillus altitudinis strain GR-8]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEEQK

Nucleotide

• Length: 597 bp

>NTDB_id=126836 ID12_RS01800 WP_007500118.1 352188..352784(+) (clpP) [Bacillus altitudinis strain GR-8]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTATCACAGCTTCTCTTCTTAGAAGCCG
AGGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCGATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCCCTTCCAAATAGTGAAGTGATGATTCACCAACCACTAGGTGGTGCGCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGAACAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	93.434	100	0.934
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.186	97.98	0.551
clpP	Streptococcus pneumoniae Rx1	55.67	97.98	0.545
clpP	Streptococcus pneumoniae D39	55.67	97.98	0.545
clpP	Streptococcus pneumoniae R6	55.67	97.98	0.545
clpP	Streptococcus pneumoniae TIGR4	55.67	97.98	0.545
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.124	97.98	0.53