Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   DP15_RS06400 Genome accession   NZ_CP008926
Coordinates   1265027..1265578 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain ATCC 19615     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1260027..1270578
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DP15_RS06400 (DP15_1318) comX/sigX/comX2/sigX2 1265027..1265578 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  DP15_RS06405 (DP15_1319) - 1266137..1266664 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  DP15_RS06410 (DP15_1320) yqeH 1266664..1267782 (+) 1119 WP_038432795.1 ribosome biogenesis GTPase YqeH -
  DP15_RS06415 (DP15_1321) yhbY 1267807..1268115 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  DP15_RS06420 (DP15_1322) - 1268184..1268815 (+) 632 Protein_1224 nicotinate-nucleotide adenylyltransferase -
  DP15_RS06425 (DP15_1323) yqeK 1268812..1269405 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  DP15_RS06430 (DP15_1324) rsfS 1269429..1269782 (+) 354 WP_038432978.1 ribosome silencing factor -
  DP15_RS06435 (DP15_1325) - 1269830..1270573 (+) 744 WP_038432800.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=125802 DP15_RS06400 WP_010921894.1 1265027..1265578(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain ATCC 19615]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=125802 DP15_RS06400 WP_010921894.1 1265027..1265578(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain ATCC 19615]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.