Detailed information NTG0125707

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ID09_RS07840
• Genome accession: NZ_CP008921
• Coordinates: 1608171..1608761 (-)
• Length: 196 a.a.
• NCBI ID: WP_024390620.1
• Uniprot ID: -
• Organism: Streptococcus suis 6407
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1603171..1613761

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ID09_RS07815 (ID09_08050)	-	1603664..1604428 (-)	765	WP_002937291.1	ABC transporter ATP-binding protein	-
ID09_RS07820 (ID09_08055)	-	1604428..1605375 (-)	948	WP_002937293.1	branched-chain amino acid ABC transporter permease	-
ID09_RS07825 (ID09_08060)	-	1605378..1606265 (-)	888	WP_002937296.1	branched-chain amino acid ABC transporter permease	-
ID09_RS07830 (ID09_08065)	-	1606471..1607640 (-)	1170	WP_002937297.1	ABC transporter substrate-binding protein	-
ID09_RS07835 (ID09_08070)	-	1607772..1608044 (-)	273	WP_024390621.1	YlbG family protein	-
ID09_RS07840 (ID09_08075)	clpP	1608171..1608761 (-)	591	WP_024390620.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ID09_RS07845 (ID09_08080)	upp	1608877..1609506 (-)	630	WP_012027487.1	uracil phosphoribosyltransferase	-
ID09_RS07850 (ID09_08085)	-	1609586..1611202 (-)	1617	WP_014637076.1	glycoside hydrolase family 13 protein	-
ID09_RS07855 (ID09_08090)	gtfA	1611275..1612723 (-)	1449	WP_012027490.1	sucrose phosphorylase	-
ID09_RS07860 (ID09_08095)	-	1612794..1613624 (-)	831	WP_002937312.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21524.76 Da
• Isoelectric Point: 5.7110

>NTDB_id=125707 ID09_RS07840 WP_024390620.1 1608171..1608761(-) (clpP) [Streptococcus suis 6407]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGTAASMGTIIASSGAKSKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEKILADNSGK
TVKQIHKDAERDYWMSAEETLAYGFIDQIMDNTKVK

Nucleotide

• Length: 591 bp

>NTDB_id=125707 ID09_RS07840 WP_024390620.1 1608171..1608761(-) (clpP) [Streptococcus suis 6407]
ATGATTCCAGTCGTTATTGAACAAACTAGCCGTGGTGAGCGTTCTTATGATATTTACTCACGCCTTTTGAAAGACCGCAT
TATCATGTTGACAGGACCAGTTGAGGACAACATGGCAAACTCTATCATTGCACAATTGCTTTTCCTTGATGCCCAAGACC
CTACAAAGGATATTTACCTCTATGTTAATACGCCAGGAGGATCGGTGTCAGCAGGTCTTGCCATTGTAGACACGATGAAT
TTCATTAAAGCTGATGTTCAAACCATCGTTATGGGAACAGCTGCGAGCATGGGAACCATCATTGCATCAAGCGGTGCCAA
GAGCAAACGTTTCATGTTGCCAAATGCAGAGTACATGATTCACCAGCCAATGGGTGGAACTGGTGGTGGTACTCAGCAAA
CAGACATGGCTATTGCTGCAGAACACCTATTAAAAACACGTAATAAGCTAGAAAAAATCTTGGCAGACAACTCAGGTAAG
ACAGTCAAGCAAATCCATAAGGATGCGGAACGTGATTACTGGATGTCAGCTGAAGAAACCTTGGCTTACGGATTTATTGA
CCAGATTATGGACAATACAAAAGTCAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes JRS4	91.837	100	0.918
clpP	Streptococcus pyogenes MGAS315	91.837	100	0.918
clpP	Streptococcus mutans UA159	89.796	100	0.898
clpP	Streptococcus pneumoniae R6	88.265	100	0.883
clpP	Streptococcus pneumoniae Rx1	88.265	100	0.883
clpP	Streptococcus pneumoniae D39	88.265	100	0.883
clpP	Streptococcus pneumoniae TIGR4	88.265	100	0.883
clpP	Streptococcus thermophilus LMG 18311	88.265	100	0.883
clpP	Streptococcus thermophilus LMD-9	88.265	100	0.883
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	83.673	100	0.837
clpP	Lactococcus lactis subsp. cremoris KW2	83.163	100	0.832
clpP	Bacillus subtilis subsp. subtilis str. 168	57.653	100	0.577
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	98.469	0.571