Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | BRLA_RS22450 | Genome accession | NZ_CP007806 |
| Coordinates | 5094135..5094602 (-) | Length | 155 a.a. |
| NCBI ID | WP_003334008.1 | Uniprot ID | A0AAP3GAQ8 |
| Organism | Brevibacillus laterosporus LMG 15441 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 5089135..5099602
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BRLA_RS22430 (BRLA_c046390) | rplI | 5090384..5090827 (-) | 444 | WP_003334013.1 | 50S ribosomal protein L9 | - |
| BRLA_RS22435 (BRLA_c046400) | - | 5090843..5092780 (-) | 1938 | WP_003334012.1 | DHH family phosphoesterase | - |
| BRLA_RS22440 (BRLA_c046410) | - | 5092796..5093776 (-) | 981 | WP_003334010.1 | DUF2232 domain-containing protein | - |
| BRLA_RS22445 (BRLA_c046420) | rpsR | 5093852..5094082 (-) | 231 | WP_003334009.1 | 30S ribosomal protein S18 | - |
| BRLA_RS22450 (BRLA_c046430) | ssbA | 5094135..5094602 (-) | 468 | WP_003334008.1 | single-stranded DNA-binding protein | Machinery gene |
| BRLA_RS22455 (BRLA_c046440) | rpsF | 5094627..5094914 (-) | 288 | WP_003334007.1 | 30S ribosomal protein S6 | - |
| BRLA_RS22460 (BRLA_c046450) | ychF | 5095052..5096152 (-) | 1101 | WP_003334006.1 | redox-regulated ATPase YchF | - |
| BRLA_RS22465 (BRLA_c046460) | - | 5096795..5097514 (-) | 720 | WP_236867701.1 | hypothetical protein | - |
| BRLA_RS24105 (BRLA_c046470) | - | 5097628..5097843 (+) | 216 | WP_035318993.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 155 a.a. Molecular weight: 16981.84 Da Isoelectric Point: 5.2753
>NTDB_id=123538 BRLA_RS22450 WP_003334008.1 5094135..5094602(-) (ssbA) [Brevibacillus laterosporus LMG 15441]
MLNRVILIGNLTKDPELRYTPNGVAVTTFTLAINRPYSGAGGEKETDFINIVAWRQLADLCANYLRKGRKAAVEGRLQTR
SYDNKEGKRVYVTEVVADNVQFLSSREASEGNTGYDPGPSYGGTRPASKGNNDSFNDPFADSGKPINISDDDLPF
MLNRVILIGNLTKDPELRYTPNGVAVTTFTLAINRPYSGAGGEKETDFINIVAWRQLADLCANYLRKGRKAAVEGRLQTR
SYDNKEGKRVYVTEVVADNVQFLSSREASEGNTGYDPGPSYGGTRPASKGNNDSFNDPFADSGKPINISDDDLPF
Nucleotide
Download Length: 468 bp
>NTDB_id=123538 BRLA_RS22450 WP_003334008.1 5094135..5094602(-) (ssbA) [Brevibacillus laterosporus LMG 15441]
ATGCTAAATCGTGTTATTTTAATTGGAAACTTAACAAAGGACCCTGAATTACGTTATACGCCCAATGGTGTTGCGGTAAC
GACCTTTACCTTGGCGATAAATCGTCCTTATTCTGGAGCCGGTGGCGAAAAAGAAACGGACTTTATCAATATTGTAGCAT
GGCGTCAATTGGCTGATCTATGTGCAAACTATCTTCGTAAAGGTAGAAAAGCTGCTGTAGAAGGCCGTTTACAAACCAGA
AGCTATGATAATAAAGAAGGTAAAAGAGTATACGTAACAGAAGTTGTCGCAGATAACGTGCAATTCCTAAGCTCACGTGA
AGCGAGTGAAGGAAACACCGGCTATGACCCTGGTCCAAGCTATGGTGGCACGCGTCCGGCTTCCAAAGGTAATAACGATT
CATTTAATGACCCCTTCGCCGATTCTGGAAAGCCGATTAACATCTCAGATGATGATCTGCCTTTCTAG
ATGCTAAATCGTGTTATTTTAATTGGAAACTTAACAAAGGACCCTGAATTACGTTATACGCCCAATGGTGTTGCGGTAAC
GACCTTTACCTTGGCGATAAATCGTCCTTATTCTGGAGCCGGTGGCGAAAAAGAAACGGACTTTATCAATATTGTAGCAT
GGCGTCAATTGGCTGATCTATGTGCAAACTATCTTCGTAAAGGTAGAAAAGCTGCTGTAGAAGGCCGTTTACAAACCAGA
AGCTATGATAATAAAGAAGGTAAAAGAGTATACGTAACAGAAGTTGTCGCAGATAACGTGCAATTCCTAAGCTCACGTGA
AGCGAGTGAAGGAAACACCGGCTATGACCCTGGTCCAAGCTATGGTGGCACGCGTCCGGCTTCCAAAGGTAATAACGATT
CATTTAATGACCCCTTCGCCGATTCTGGAAAGCCGATTAACATCTCAGATGATGATCTGCCTTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
53.488 |
100 |
0.594 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
47.647 |
100 |
0.523 |
| ssb | Vibrio cholerae strain A1552 |
34.637 |
100 |
0.4 |
| ssb | Glaesserella parasuis strain SC1401 |
33.708 |
100 |
0.387 |
| ssb | Neisseria meningitidis MC58 |
33.721 |
100 |
0.374 |
| ssb | Neisseria gonorrhoeae MS11 |
33.721 |
100 |
0.374 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
54.369 |
66.452 |
0.361 |