Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | MA06_RS12920 | Genome accession | NZ_CP007626 |
| Coordinates | 2061391..2061972 (+) | Length | 193 a.a. |
| NCBI ID | WP_001049163.1 | Uniprot ID | A0A366GQ86 |
| Organism | Bacillus pseudomycoides strain 219298 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2056391..2066972
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MA06_RS12885 (DJ92_2190) | - | 2057341..2057547 (+) | 207 | WP_003201925.1 | DUF1657 domain-containing protein | - |
| MA06_RS12890 (DJ92_2191) | - | 2057663..2058151 (+) | 489 | WP_018765091.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| MA06_RS12895 (DJ92_2192) | spoVAC | 2058186..2058662 (+) | 477 | WP_003201921.1 | stage V sporulation protein AC | - |
| MA06_RS12900 (DJ92_2193) | spoVAD | 2058663..2059679 (+) | 1017 | WP_003201920.1 | stage V sporulation protein AD | - |
| MA06_RS12905 (DJ92_2194) | spoVAE | 2059676..2060026 (+) | 351 | WP_016112492.1 | stage V sporulation protein AE | - |
| MA06_RS12910 (DJ92_2195) | - | 2060038..2060244 (+) | 207 | WP_018783329.1 | DUF1657 domain-containing protein | - |
| MA06_RS12915 (DJ92_2196) | - | 2060265..2061140 (+) | 876 | WP_003201914.1 | DUF421 domain-containing protein | - |
| MA06_RS12920 (DJ92_2197) | clpP | 2061391..2061972 (+) | 582 | WP_001049163.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| MA06_RS12925 (DJ92_2198) | - | 2062299..2063009 (-) | 711 | WP_018783328.1 | Crp/Fnr family transcriptional regulator | - |
| MA06_RS12930 (DJ92_2199) | rd | 2063264..2063428 (-) | 165 | WP_018783327.1 | rubredoxin | - |
| MA06_RS12935 (DJ92_2200) | - | 2063455..2064675 (-) | 1221 | WP_018783326.1 | FAD-dependent oxidoreductase | - |
| MA06_RS12940 (DJ92_2201) | - | 2064697..2065932 (-) | 1236 | WP_018783325.1 | FprA family A-type flavoprotein | - |
| MA06_RS12945 (DJ92_2202) | - | 2066096..2066803 (-) | 708 | WP_018783324.1 | methyltransferase domain-containing protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21447.68 Da Isoelectric Point: 5.0423
>NTDB_id=121762 MA06_RS12920 WP_001049163.1 2061391..2061972(+) (clpP) [Bacillus pseudomycoides strain 219298]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAERALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAERALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=121762 MA06_RS12920 WP_001049163.1 2061391..2061972(+) (clpP) [Bacillus pseudomycoides strain 219298]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGCGCAATTGATGACAACGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AGGATCCAGAAAAAGATATTCACATCTACATCAACAGTCCTGGCGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATTTGTATCGGTATGGCAGCATCTATGGGTGCTTTCCTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGCGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAATTAAACCAAATTCTTGCTGATCGCACAGGTCAA
CCATTAGAAGTTCTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAGAGCACTAGAATACGGCTTAATCGA
TAAAATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGCGCAATTGATGACAACGTAGCAAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AGGATCCAGAAAAAGATATTCACATCTACATCAACAGTCCTGGCGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATTTGTATCGGTATGGCAGCATCTATGGGTGCTTTCCTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGCGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAATTAAACCAAATTCTTGCTGATCGCACAGGTCAA
CCATTAGAAGTTCTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAGAGCACTAGAATACGGCTTAATCGA
TAAAATCTTTACAAATCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |