Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   SD89_RS06195 Genome accession   NZ_CP010449
Coordinates   1263411..1263593 (-) Length   60 a.a.
NCBI ID   WP_053308468.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NGAS322     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1258411..1268593
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SD89_RS06180 (SD89_06195) - 1258851..1259546 (-) 696 WP_053308467.1 phosphoglycerate mutase -
  SD89_RS06185 (SD89_06200) - 1259785..1260720 (+) 936 WP_032465092.1 dihydroorotate oxidase -
  SD89_RS10305 - 1260775..1260948 (-) 174 WP_011017962.1 hypothetical protein -
  SD89_RS06190 (SD89_06205) - 1261020..1262882 (-) 1863 WP_014407683.1 heavy metal translocating P-type ATPase -
  SD89_RS06195 (SD89_06210) prx 1263411..1263593 (-) 183 WP_053308468.1 Paratox Regulator
  SD89_RS06200 (SD89_06215) spel 1263708..1264496 (-) 789 WP_053308469.1 streptococcal pyrogenic exotoxin SpeL -
  SD89_RS06205 (SD89_06220) spem 1264778..1265491 (-) 714 WP_011017838.1 streptococcal pyrogenic exotoxin SpeM -
  SD89_RS06210 (SD89_06225) - 1266357..1266998 (-) 642 Protein_1187 CHAP domain-containing protein -
  SD89_RS06215 (SD89_06230) - 1267111..1267803 (-) 693 WP_002994484.1 AP2 domain-containing protein -
  SD89_RS06220 (SD89_06235) - 1268039..1268593 (-) 555 Protein_1189 glycoside hydrolase family 73 protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 7066.02 Da        Isoelectric Point: 4.0338

>NTDB_id=121312 SD89_RS06195 WP_053308468.1 1263411..1263593(-) (prx) [Streptococcus pyogenes strain NGAS322]
MLTYDEFKQAIDDGYIVGDTVMIVRKNGQIFDYVLPNEKIRDWEVVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=121312 SD89_RS06195 WP_053308468.1 1263411..1263593(-) (prx) [Streptococcus pyogenes strain NGAS322]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGATGACGGATATATCGTAGGAGACACAGTTATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAGAGATTGGGAGGTTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

88.333

100

0.883
  prx Streptococcus pyogenes MGAS8232

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

70

100

0.7
  prx Streptococcus pyogenes MGAS315

90.476

70

0.633
  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55