Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   DK43_RS02120 Genome accession   NZ_CP007573
Coordinates   434273..435769 (+) Length   498 a.a.
NCBI ID   WP_022525149.1    Uniprot ID   A0AAI9J6M6
Organism   Streptococcus anginosus strain SA1     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 429273..440769
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK43_RS02110 (DK43_02190) amiA3 429746..431722 (+) 1977 WP_022525151.1 peptide ABC transporter substrate-binding protein Regulator
  DK43_RS02115 (DK43_02195) amiA3 431919..433898 (+) 1980 WP_022525150.1 peptide ABC transporter substrate-binding protein Regulator
  DK43_RS02120 (DK43_02200) amiC 434273..435769 (+) 1497 WP_022525149.1 ABC transporter permease Regulator
  DK43_RS02125 (DK43_02205) amiD 435769..436695 (+) 927 WP_003026180.1 oligopeptide ABC transporter permease OppC Regulator
  DK43_RS02130 (DK43_02210) amiE 436704..437771 (+) 1068 WP_004224088.1 ABC transporter ATP-binding protein Regulator
  DK43_RS02135 (DK43_02215) amiF 437782..438705 (+) 924 WP_003031730.1 ATP-binding cassette domain-containing protein Regulator
  DK43_RS02140 (DK43_02220) - 438891..439597 (+) 707 Protein_434 HAD family hydrolase -
  DK43_RS02145 (DK43_02225) - 439657..440622 (-) 966 WP_003039503.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55876.03 Da        Isoelectric Point: 10.0583

>NTDB_id=121195 DK43_RS02120 WP_022525149.1 434273..435769(+) (amiC) [Streptococcus anginosus strain SA1]
MKKYIFMRILRSLVSIFMVTTLTYTIIYTMVPRKLIFKQDPNYNKIATTPDKKANYENTIFERMGYIDYYDTKELQEKAS
KENSSVTVEPTNANKKIYEAYIKKLGRGWKLQQFKESKQFYATREVPVYERVLGFYGNLIQIDHTGAVKDASNPNLKRYI
RIENDPAIGWSVVGSGTKHKYLLYFNSQFPYIHQNFVRLNLGISYPTYANLPVLQVISQGQGQTKTSEVQFPTGKKTSSV
NIYTRTYKSPKQADARDVANYGKDDPYTATESNYQYPSMIVSSSIVGLIGLALSYLIAVPLGSYMARFKNTLFDSISTGA
LTFLMSLPTIALVYIIRLIGSAIGLPDSFPILGAGDWRSYVLPAVILGLLSAPWTAVWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSSIPNSVIGVITGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCLSIFALLLGD
ILMTVLDPRIKLTSKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=121195 DK43_RS02120 WP_022525149.1 434273..435769(+) (amiC) [Streptococcus anginosus strain SA1]
ATGAAGAAATATATTTTTATGCGTATCTTACGCTCTTTAGTATCTATTTTCATGGTAACAACGCTGACTTACACCATTAT
CTATACTATGGTGCCTAGGAAGTTGATTTTCAAACAGGACCCGAACTATAACAAAATAGCGACAACTCCTGATAAAAAAG
CCAATTACGAAAATACGATTTTTGAGCGTATGGGTTACATTGACTACTATGATACGAAGGAATTGCAAGAAAAAGCTAGT
AAAGAGAATTCCTCTGTAACAGTAGAACCTACTAATGCAAATAAAAAAATCTATGAAGCTTACATCAAAAAGCTGGGACG
CGGTTGGAAATTGCAGCAATTTAAAGAAAGCAAGCAATTTTATGCAACTCGTGAAGTTCCAGTCTATGAACGCGTTCTTG
GTTTCTATGGTAATTTGATTCAAATTGACCATACCGGTGCTGTGAAAGATGCTTCTAATCCGAACTTGAAGCGATATATT
CGCATTGAAAACGATCCTGCTATTGGTTGGTCCGTTGTTGGTTCTGGAACGAAACATAAATATTTATTGTACTTCAATAG
TCAGTTTCCATATATCCACCAAAATTTTGTGAGATTAAATCTGGGAATCTCCTATCCAACCTATGCCAATCTTCCTGTTT
TACAGGTTATTTCACAAGGGCAAGGTCAAACAAAAACATCAGAAGTTCAATTCCCAACAGGAAAGAAAACTTCATCTGTT
AATATTTATACGCGTACATATAAGTCTCCAAAACAAGCTGATGCACGCGATGTTGCTAATTACGGAAAAGATGACCCTTA
TACGGCAACAGAGAGCAATTATCAATATCCATCGATGATTGTGAGCTCTTCTATTGTTGGTTTGATTGGATTGGCTTTGT
CTTACTTAATTGCCGTTCCACTTGGATCTTATATGGCTCGCTTTAAAAATACGTTATTTGATAGTATTTCAACCGGTGCA
TTGACTTTCTTGATGTCACTGCCAACTATTGCTTTAGTTTATATCATTCGGCTGATCGGTTCAGCGATTGGCTTGCCTGA
TTCATTCCCTATTTTGGGAGCAGGTGATTGGCGCTCTTATGTGCTGCCGGCAGTCATTCTTGGACTCTTGAGTGCGCCTT
GGACAGCCGTTTGGATTCGTCGTTATATGATTGACTTGCAATCACAAGATTTTGTTCGTTTTGCACGTGCAAAAGGTCTT
TCTGAAAAAGAAATTTCAAATAAACATATTTTCAAAAATGCCATGGTGCCACTTGTATCCAGCATTCCAAACTCAGTTAT
TGGGGTTATTACAGGTGCAACTTTGACTGAAACAGTCTTCGCTTTCCCTGGTATGGGTAAGATGTTGATTGACTCTGTTA
AAGCTTCAAATAACTCTATGGTCGTTGGTCTTGTCTTTATCTTTACATGTCTTTCTATCTTCGCTCTTCTATTGGGTGAT
ATTCTGATGACAGTACTTGATCCACGTATTAAATTAACATCAAAAGGAGGTAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

80.12

100

0.801
  amiC Streptococcus thermophilus LMG 18311

79.719

100

0.797
  amiC Streptococcus thermophilus LMD-9

79.518

100

0.795

Multiple sequence alignment