Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   DK43_RS02130 Genome accession   NZ_CP007573
Coordinates   436704..437771 (+) Length   355 a.a.
NCBI ID   WP_004224088.1    Uniprot ID   A0AAI9NHC3
Organism   Streptococcus anginosus strain SA1     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 431704..442771
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK43_RS02115 (DK43_02195) amiA3 431919..433898 (+) 1980 WP_022525150.1 peptide ABC transporter substrate-binding protein Regulator
  DK43_RS02120 (DK43_02200) amiC 434273..435769 (+) 1497 WP_022525149.1 ABC transporter permease Regulator
  DK43_RS02125 (DK43_02205) amiD 435769..436695 (+) 927 WP_003026180.1 oligopeptide ABC transporter permease OppC Regulator
  DK43_RS02130 (DK43_02210) amiE 436704..437771 (+) 1068 WP_004224088.1 ABC transporter ATP-binding protein Regulator
  DK43_RS02135 (DK43_02215) amiF 437782..438705 (+) 924 WP_003031730.1 ATP-binding cassette domain-containing protein Regulator
  DK43_RS02140 (DK43_02220) - 438891..439597 (+) 707 Protein_434 HAD family hydrolase -
  DK43_RS02145 (DK43_02225) - 439657..440622 (-) 966 WP_003039503.1 LacI family DNA-binding transcriptional regulator -
  DK43_RS02150 (DK43_02230) - 440603..442060 (-) 1458 WP_022525148.1 sucrose-6-phosphate hydrolase -

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39714.44 Da        Isoelectric Point: 4.7502

>NTDB_id=121197 DK43_RS02130 WP_004224088.1 436704..437771(+) (amiE) [Streptococcus anginosus strain SA1]
MTQEKNVILTARDIVVEFDVRDKVLTAIRGVSLDLIEGEVLALVGESGSGKSVLTKTFTGMLEENGRVAQGTIDYRGQDL
TKLKSNKDWEPIRGVKIATIFQDPMTSLDPINTIGSQITEVIIKHQKKTPKEAKEMAVDYMNKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIDLLKSLQHEYEFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYSHLQGDAFALRSDYAMEIDFEEKPPQIYVSDTHWAK
TWLLHENAPKVNKPAVIDDLHEKISLKMGFAHLDA

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=121197 DK43_RS02130 WP_004224088.1 436704..437771(+) (amiE) [Streptococcus anginosus strain SA1]
ATGACACAAGAAAAAAATGTAATATTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGATAAGGTCTTAACAGC
TATTCGTGGTGTTTCGCTTGACCTCATTGAAGGTGAAGTTCTTGCACTTGTAGGGGAATCTGGTTCTGGTAAGTCTGTTT
TGACAAAGACATTTACAGGAATGTTAGAGGAAAATGGTCGAGTTGCTCAAGGAACGATTGATTACCGGGGGCAAGATTTG
ACAAAATTGAAGTCTAATAAAGATTGGGAACCTATACGCGGTGTTAAAATTGCGACAATCTTCCAAGATCCGATGACGAG
TTTGGACCCTATTAACACAATTGGTAGCCAAATTACAGAAGTGATTATCAAGCATCAAAAGAAAACGCCAAAAGAAGCAA
AAGAAATGGCTGTTGACTATATGAATAAGGTCGGCATTCCTGATGCTGAAAAGCGTTTTAATGAATACCCATTCCAATAT
TCAGGAGGAATGCGTCAACGGATTGTTATCGCTATTGCGCTTGCTTGTCGACCTGATATCCTTATCTGTGATGAACCAAC
GACAGCGCTTGACGTTACGATTCAGGCACAAATCATTGATTTGTTGAAATCTTTGCAACACGAGTATGAATTCACAACTA
TTTTTATCACCCACGACCTGGGAGTGGTAGCAAGTATTGCAGATAAGGTTGCGGTTATGTATGCTGGTGAAATCGTTGAA
TACGGAACAGTAGAAGAAGTCTTTTACGATCCACGTCATCCTTACACTTGGAGTTTGTTATCTAGTCTGCCTCAGTTGGC
AGATGATAAGGGTGAGTTGTATTCAATTCCTGGAACGCCGCCATCTCTTTATTCACATTTACAAGGAGATGCATTTGCCT
TGCGTTCAGATTATGCGATGGAAATTGATTTTGAGGAAAAACCGCCTCAAATCTATGTGTCAGATACGCATTGGGCAAAA
ACATGGTTGCTTCATGAAAATGCTCCAAAAGTGAATAAGCCAGCTGTTATTGATGATTTGCACGAAAAAATTAGCTTAAA
AATGGGCTTTGCCCATTTAGACGCCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

86.402

99.437

0.859

  amiE Streptococcus thermophilus LMG 18311

84.986

99.437

0.845

  amiE Streptococcus thermophilus LMD-9

84.986

99.437

0.845

  oppD Streptococcus mutans UA159

56.215

99.718

0.561


Multiple sequence alignment